Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR3180-4-201ENST00000582223 153 ntBASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 AL096828.2-201ENST00000567259 1965 ntBASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 DUX4L26-201ENST00000489078 1255 ntBASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 AL031432.5-201ENST00000641059 760 ntBASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIMC1Q8NDZ2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 AL049597.2-201ENST00000565575 961 ntBASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 AL162741.1-201ENST00000565563 1558 ntBASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIMC1Q8NDZ2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 STARP1-201ENST00000397973 869 ntBASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 AC063952.2-201ENST00000498792 1227 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms