Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDM1BQ8NB78 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 IGHV3-47-201ENST00000425060 335 ntBASIC18.46■□□□□ 0.55
KDM1BQ8NB78 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 KRT17P6-201ENST00000453795 1220 ntBASIC18.46■□□□□ 0.55
KDM1BQ8NB78 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 AC126763.1-201ENST00000552015 2118 ntBASIC18.46■□□□□ 0.55
KDM1BQ8NB78 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDM1BQ8NB78 AC068880.1-201ENST00000507289 2297 ntBASIC18.46■□□□□ 0.54
KDM1BQ8NB78 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
KDM1BQ8NB78 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.46■□□□□ 0.54
KDM1BQ8NB78 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 AC011840.4-201ENST00000578471 627 ntBASIC18.45■□□□□ 0.54
KDM1BQ8NB78 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 AL499627.1-201ENST00000569373 2188 ntBASIC18.45■□□□□ 0.54
KDM1BQ8NB78 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 ABALON-201ENST00000629058 1903 ntBASIC18.45■□□□□ 0.54
KDM1BQ8NB78 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 PCDHB18P-201ENST00000524813 2368 ntBASIC18.45■□□□□ 0.54
KDM1BQ8NB78 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.45■□□□□ 0.54
KDM1BQ8NB78 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 FAAHP1-202ENST00000446499 1238 ntBASIC18.44■□□□□ 0.54
KDM1BQ8NB78 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 AC074051.2-201ENST00000565115 352 ntBASIC18.44■□□□□ 0.54
KDM1BQ8NB78 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 AC009154.2-201ENST00000621177 724 ntBASIC18.44■□□□□ 0.54
KDM1BQ8NB78 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM1BQ8NB78 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM1BQ8NB78 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KDM1BQ8NB78 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KDM1BQ8NB78 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.43■□□□□ 0.54
KDM1BQ8NB78 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.43■□□□□ 0.54
KDM1BQ8NB78 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms