Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 AC138028.4-201ENST00000564984 1845 ntBASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 AC112698.1-201ENST00000510299 916 ntBASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 AC233702.3-201ENST00000578656 1387 ntBASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01555Q8NAE3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 LINC00265-3P-201ENST00000447588 903 ntBASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 AC100803.2-201ENST00000562459 1963 ntBASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 FLJ13224-201ENST00000313737 1514 ntBASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LINC01555Q8NAE3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms