Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS52Q8N1B4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 CROCCP3-202ENST00000420820 1947 ntBASIC19.61■□□□□ 0.73
VPS52Q8N1B4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 MRPL3P1-201ENST00000400109 1033 ntBASIC19.61■□□□□ 0.73
VPS52Q8N1B4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 AC091607.1-201ENST00000490318 1060 ntBASIC19.61■□□□□ 0.73
VPS52Q8N1B4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 HEIH-201ENST00000623091 1652 ntBASIC19.61■□□□□ 0.73
VPS52Q8N1B4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VPS52Q8N1B4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 AKR1C7P-201ENST00000305623 895 ntBASIC19.6■□□□□ 0.73
VPS52Q8N1B4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 NUS1P2-201ENST00000417358 873 ntBASIC19.6■□□□□ 0.73
VPS52Q8N1B4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 AC011840.4-201ENST00000578471 627 ntBASIC19.6■□□□□ 0.73
VPS52Q8N1B4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS52Q8N1B4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 AC005082.1-201ENST00000413042 2259 ntBASIC19.59■□□□□ 0.73
VPS52Q8N1B4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 MINOS1P3-201ENST00000457048 203 ntBASIC19.59■□□□□ 0.73
VPS52Q8N1B4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS52Q8N1B4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
VPS52Q8N1B4 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.58■□□□□ 0.73
VPS52Q8N1B4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS52Q8N1B4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.58■□□□□ 0.73
VPS52Q8N1B4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms