Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.98■□□□□ 0.31
CCDC71Q8IV32 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 PCED1CP-201ENST00000419887 785 ntBASIC16.98■□□□□ 0.31
CCDC71Q8IV32 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 PP12613-201ENST00000424958 2230 ntBASIC16.98■□□□□ 0.31
CCDC71Q8IV32 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 KRT8P32-201ENST00000512863 1461 ntBASIC16.98■□□□□ 0.31
CCDC71Q8IV32 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 AL671277.2-201ENST00000458060 996 ntBASIC16.97■□□□□ 0.31
CCDC71Q8IV32 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 FAM86EP-206ENST00000510506 987 ntBASIC16.97■□□□□ 0.31
CCDC71Q8IV32 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 AL121956.5-201ENST00000625261 221 ntBASIC16.97■□□□□ 0.31
CCDC71Q8IV32 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71Q8IV32 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 KRT8P11-201ENST00000409686 1436 ntBASIC16.96■□□□□ 0.31
CCDC71Q8IV32 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 AL357033.4-201ENST00000617703 1807 ntBASIC16.96■□□□□ 0.31
CCDC71Q8IV32 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 KRT18P56-201ENST00000507275 550 ntBASIC16.96■□□□□ 0.31
CCDC71Q8IV32 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 AC093458.2-201ENST00000623150 629 ntBASIC16.96■□□□□ 0.31
CCDC71Q8IV32 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.96■□□□□ 0.31
CCDC71Q8IV32 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71Q8IV32 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC71Q8IV32 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.96■□□□□ 0.3
CCDC71Q8IV32 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC71Q8IV32 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC71Q8IV32 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC71Q8IV32 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CCDC71Q8IV32 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC71Q8IV32 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.96■□□□□ 0.3
CCDC71Q8IV32 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.96■□□□□ 0.3
CCDC71Q8IV32 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC71Q8IV32 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms