Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 LTBP4-233ENST00000612121 755 ntTSL 316.08■□□□□ 0.164e-6■□□□□ 9.6
SND1Q7KZF4 YPEL5-206ENST00000470120 653 ntTSL 215.96■□□□□ 0.154e-6■□□□□ 9.6
SND1Q7KZF4 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.78■□□□□ 0.124e-6■□□□□ 9.6
SND1Q7KZF4 LTBP4-234ENST00000612845 527 ntTSL 415.58■□□□□ 0.084e-6■□□□□ 9.6
SND1Q7KZF4 LTBP4-228ENST00000600499 580 ntTSL 215.14■□□□□ 0.014e-6■□□□□ 9.6
SND1Q7KZF4 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.194e-6■□□□□ 9.6
SND1Q7KZF4 LTBP4-216ENST00000597071 670 ntTSL 213.43□□□□□ -0.264e-6■□□□□ 9.6
SND1Q7KZF4 SLC39A8-204ENST00000502903 570 ntTSL 411.13□□□□□ -0.634e-6■□□□□ 9.6
SND1Q7KZF4 YPEL5-203ENST00000379520 2560 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.644e-6■□□□□ 9.6
SND1Q7KZF4 CAPRIN1-208ENST00000530008 580 ntTSL 410.83□□□□□ -0.684e-6■□□□□ 9.6
SND1Q7KZF4 PRRC1-203ENST00000507774 703 ntTSL 210.67□□□□□ -0.74e-6■□□□□ 9.6
SND1Q7KZF4 SLC30A5-205ENST00000507354 2310 ntTSL 1 (best)10.66□□□□□ -0.74e-6■□□□□ 9.6
SND1Q7KZF4 PRRC1-205ENST00000512871 703 ntTSL 210.35□□□□□ -0.754e-6■□□□□ 9.6
SND1Q7KZF4 SLC39A8-207ENST00000512657 558 ntTSL 49.82□□□□□ -0.844e-6■□□□□ 9.6
SND1Q7KZF4 SLC30A5-206ENST00000511158 763 ntTSL 29.67□□□□□ -0.864e-6■□□□□ 9.6
SND1Q7KZF4 RELN-205ENST00000473457 641 ntTSL 39.6□□□□□ -0.874e-6■□□□□ 9.6
SND1Q7KZF4 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.874e-6■□□□□ 9.6
SND1Q7KZF4 YPEL5-210ENST00000495673 935 ntTSL 1 (best)9.17□□□□□ -0.944e-6■□□□□ 9.6
SND1Q7KZF4 HEXB-212ENST00000513867 711 ntTSL 28.21□□□□□ -1.14e-6■□□□□ 9.6
SND1Q7KZF4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.114e-6■□□□□ 9.6
SND1Q7KZF4 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.62□□□□□ -1.194e-6■□□□□ 9.6
SND1Q7KZF4 YPEL5-209ENST00000492439 787 ntTSL 37.59□□□□□ -1.194e-6■□□□□ 9.6
SND1Q7KZF4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.224e-6■□□□□ 9.6
SND1Q7KZF4 ARF4-204ENST00000486310 1601 ntTSL 37.34□□□□□ -1.234e-6■□□□□ 9.6
SND1Q7KZF4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.264e-6■□□□□ 9.6
SND1Q7KZF4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.05□□□□□ -1.284e-6■□□□□ 9.6
SND1Q7KZF4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.324e-6■□□□□ 9.6
SND1Q7KZF4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.334e-6■□□□□ 9.6
SND1Q7KZF4 SLC39A8-205ENST00000510255 678 ntTSL 56.63□□□□□ -1.354e-6■□□□□ 9.6
SND1Q7KZF4 YPEL5-208ENST00000490211 653 ntTSL 56.08□□□□□ -1.444e-6■□□□□ 9.6
SND1Q7KZF4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.454e-6■□□□□ 9.6
SND1Q7KZF4 SLC30A5-208ENST00000513937 555 ntTSL 35.98□□□□□ -1.454e-6■□□□□ 9.6
SND1Q7KZF4 ATF7IP-207ENST00000535738 619 ntTSL 25.61□□□□□ -1.514e-6■□□□□ 9.6
SND1Q7KZF4 SLC39A8-208ENST00000514000 413 ntTSL 55.57□□□□□ -1.524e-6■□□□□ 9.6
SND1Q7KZF4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.554e-6■□□□□ 9.6
SND1Q7KZF4 SPON2-208ENST00000504909 551 ntTSL 421.96■■□□□ 1.113e-13■□□□□ 9.6
SND1Q7KZF4 SPON2-206ENST00000503765 597 ntTSL 315.59■□□□□ 0.093e-13■□□□□ 9.6
SND1Q7KZF4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.211e-11■□□□□ 9.6
SND1Q7KZF4 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.321e-11■□□□□ 9.6
SND1Q7KZF4 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.61□□□□□ -0.072e-11■□□□□ 9.5
SND1Q7KZF4 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC14.21□□□□□ -0.132e-11■□□□□ 9.5
SND1Q7KZF4 MDH2-201ENST00000315758 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.322e-11■□□□□ 9.5
SND1Q7KZF4 FAT1-208ENST00000509647 1852 ntTSL 1 (best)17.22■□□□□ 0.352e-8■□□□□ 9.5
SND1Q7KZF4 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC9.22□□□□□ -0.933e-6■□□□□ 9.5
SND1Q7KZF4 IQGAP1-218ENST00000633485 5863 ntTSL 58.44□□□□□ -1.063e-6■□□□□ 9.5
SND1Q7KZF4 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.123e-6■□□□□ 9.5
SND1Q7KZF4 POR-222ENST00000493973 1028 ntTSL 217.6■□□□□ 0.414e-18■□□□□ 9.5
SND1Q7KZF4 SLC16A3-208ENST00000579572 863 ntTSL 320.67■□□□□ 0.96e-13■□□□□ 9.5
SND1Q7KZF4 RPS27L-206ENST00000482846 2944 ntTSL 1 (best)16.73■□□□□ 0.271e-6■□□□□ 9.5
SND1Q7KZF4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.81□□□□□ -0.041e-6■□□□□ 9.5
SND1Q7KZF4 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.071e-6■□□□□ 9.5
SND1Q7KZF4 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC8.83□□□□□ -11e-6■□□□□ 9.5
SND1Q7KZF4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC7.57□□□□□ -1.21e-6■□□□□ 9.5
SND1Q7KZF4 NCL-207ENST00000461347 3967 ntTSL 216.21■□□□□ 0.196e-8■□□□□ 9.5
SND1Q7KZF4 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.346e-8■□□□□ 9.5
SND1Q7KZF4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.12■■□□□ 1.611e-7■□□□□ 9.5
SND1Q7KZF4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.12■■□□□ 1.611e-7■□□□□ 9.5
SND1Q7KZF4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.611e-7■□□□□ 9.5
SND1Q7KZF4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.131e-7■□□□□ 9.5
SND1Q7KZF4 SCAMP2-205ENST00000564529 866 ntTSL 215.82■□□□□ 0.121e-7■□□□□ 9.5
SND1Q7KZF4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.071e-7■□□□□ 9.5
SND1Q7KZF4 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.28■□□□□ 0.045e-9■□□□□ 9.5
SND1Q7KZF4 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.8□□□□□ -0.041e-7■□□□□ 9.5
SND1Q7KZF4 ADAM10-215ENST00000560608 587 ntTSL 414.49□□□□□ -0.091e-7■□□□□ 9.5
SND1Q7KZF4 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.091e-7■□□□□ 9.5
SND1Q7KZF4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.4□□□□□ -0.15e-9■□□□□ 9.5
SND1Q7KZF4 SCAMP2-202ENST00000562363 638 ntTSL 511.96□□□□□ -0.491e-7■□□□□ 9.5
SND1Q7KZF4 ITIH3-206ENST00000465314 456 ntTSL 311.91□□□□□ -0.51e-19■□□□□ 9.5
SND1Q7KZF4 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.715e-9■□□□□ 9.5
SND1Q7KZF4 MPC1-205ENST00000487218 918 ntTSL 510.28□□□□□ -0.761e-7■□□□□ 9.5
SND1Q7KZF4 MGST3-211ENST00000494074 772 ntTSL 29.41□□□□□ -0.91e-7■□□□□ 9.5
SND1Q7KZF4 PRKAB1-209ENST00000545870 566 ntTSL 39.05□□□□□ -0.961e-7■□□□□ 9.5
SND1Q7KZF4 MPC1-203ENST00000366868 572 ntTSL 37.91□□□□□ -1.141e-7■□□□□ 9.5
SND1Q7KZF4 PRKAB1-208ENST00000545223 583 ntTSL 27.5□□□□□ -1.211e-7■□□□□ 9.5
SND1Q7KZF4 MPC1-204ENST00000475708 651 ntTSL 52.97□□□□□ -1.931e-7■□□□□ 9.5
SND1Q7KZF4 SLC12A4-215ENST00000575857 588 ntTSL 311.21□□□□□ -0.612e-8■□□□□ 9.5
SND1Q7KZF4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.26■■□□□ 1.632e-8■□□□□ 9.5
SND1Q7KZF4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.832e-8■□□□□ 9.5
SND1Q7KZF4 UBE2D2-204ENST00000505007 1170 ntTSL 319.76■□□□□ 0.752e-8■□□□□ 9.5
SND1Q7KZF4 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC11.02□□□□□ -0.652e-8■□□□□ 9.5
SND1Q7KZF4 UBE2D2-207ENST00000511691 543 ntTSL 210.82□□□□□ -0.682e-8■□□□□ 9.5
SND1Q7KZF4 UBE2D2-203ENST00000398734 901 ntTSL 57.49□□□□□ -1.212e-8■□□□□ 9.5
SND1Q7KZF4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.332e-8■□□□□ 9.5
SND1Q7KZF4 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC13.44□□□□□ -0.262e-6■□□□□ 9.5
SND1Q7KZF4 DHRS3-203ENST00000482265 1036 ntTSL 315.8■□□□□ 0.121e-14■□□□□ 9.5
SND1Q7KZF4 TPP1-206ENST00000524903 556 ntTSL 416.2■□□□□ 0.184e-9■□□□□ 9.5
SND1Q7KZF4 TPP1-213ENST00000531754 610 ntTSL 214.76□□□□□ -0.054e-9■□□□□ 9.5
SND1Q7KZF4 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.1□□□□□ -0.154e-9■□□□□ 9.5
SND1Q7KZF4 VWDE-202ENST00000326715 1394 ntTSL 514.86□□□□□ -0.035e-7■□□□□ 9.5
SND1Q7KZF4 VWDE-203ENST00000452576 5936 ntTSL 1 (best)13.61□□□□□ -0.235e-7■□□□□ 9.5
SND1Q7KZF4 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.315e-7■□□□□ 9.5
SND1Q7KZF4 VWDE-205ENST00000521169 4700 ntTSL 512.65□□□□□ -0.385e-7■□□□□ 9.5
SND1Q7KZF4 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC12.65□□□□□ -0.385e-7■□□□□ 9.5
SND1Q7KZF4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.48■■□□□ 1.515e-6■□□□□ 9.5
SND1Q7KZF4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.47■■□□□ 1.515e-6■□□□□ 9.5
SND1Q7KZF4 PLXNB2-203ENST00000425954 609 ntTSL 218■□□□□ 0.475e-6■□□□□ 9.5
SND1Q7KZF4 SLC7A1-202ENST00000450494 547 ntTSL 217.63■□□□□ 0.415e-6■□□□□ 9.5
SND1Q7KZF4 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC14.63□□□□□ -0.075e-6■□□□□ 9.5
SND1Q7KZF4 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.075e-6■□□□□ 9.5
SND1Q7KZF4 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.085e-6■□□□□ 9.5
Retrieved 100 of 13,567 protein–RNA pairs in 424.8 ms