Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 ANO7L1-203ENST00000602586 1720 ntBASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 GMCL1P1-201ENST00000463439 1581 ntBASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC149Q6ZUS6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 AC104109.2-201ENST00000602919 1418 ntBASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 AC005104.2-201ENST00000427818 678 ntBASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 ABCD1P5-201ENST00000445663 754 ntBASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 AC145285.3-201ENST00000564603 959 ntBASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 AC027601.4-201ENST00000611259 610 ntBASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC149Q6ZUS6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 AP005117.1-201ENST00000584346 1413 ntBASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 AL691403.2-201ENST00000618460 490 ntBASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC149Q6ZUS6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms