Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 GUSBP12-201ENST00000513727 720 ntBASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 DUTP2-201ENST00000519164 463 ntBASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01556Q5JQF7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 OR6D1P-202ENST00000641007 5290 ntBASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 AC135050.7-201ENST00000624508 2218 ntBASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 AC069148.1-201ENST00000608741 768 ntBASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC01556Q5JQF7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC01556Q5JQF7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01556Q5JQF7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01556Q5JQF7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01556Q5JQF7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01556Q5JQF7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01556Q5JQF7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01556Q5JQF7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01556Q5JQF7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01556Q5JQF7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01556Q5JQF7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LINC01556Q5JQF7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01556Q5JQF7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01556Q5JQF7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01556Q5JQF7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01556Q5JQF7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC01556Q5JQF7 CHCHD2P8-201ENST00000429873 447 ntBASIC12.27□□□□□ -0.45
LINC01556Q5JQF7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms