Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 AC073621.1-201ENST00000392730 636 ntBASIC17.54■□□□□ 0.4
CACNA1EQ15878 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CACNA1EQ15878 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA1EQ15878 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.53■□□□□ 0.4
CACNA1EQ15878 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 RFPL4AP1-201ENST00000530883 850 ntBASIC17.53■□□□□ 0.4
CACNA1EQ15878 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CACNA1EQ15878 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CACNA1EQ15878 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CACNA1EQ15878 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CACNA1EQ15878 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CACNA1EQ15878 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.52■□□□□ 0.4
CACNA1EQ15878 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CACNA1EQ15878 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CACNA1EQ15878 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.52■□□□□ 0.4
CACNA1EQ15878 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CACNA1EQ15878 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.52■□□□□ 0.39
CACNA1EQ15878 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CACNA1EQ15878 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CACNA1EQ15878 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.52■□□□□ 0.39
CACNA1EQ15878 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CACNA1EQ15878 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CACNA1EQ15878 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CACNA1EQ15878 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CACNA1EQ15878 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CACNA1EQ15878 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CACNA1EQ15878 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CACNA1EQ15878 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CACNA1EQ15878 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CACNA1EQ15878 PRYP5-201ENST00000451909 266 ntBASIC17.52■□□□□ 0.39
CACNA1EQ15878 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.52■□□□□ 0.39
CACNA1EQ15878 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CACNA1EQ15878 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CACNA1EQ15878 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA1EQ15878 ANO7L1-203ENST00000602586 1720 ntBASIC17.51■□□□□ 0.39
CACNA1EQ15878 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA1EQ15878 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CACNA1EQ15878 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.51■□□□□ 0.39
CACNA1EQ15878 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.51■□□□□ 0.39
CACNA1EQ15878 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CACNA1EQ15878 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.51■□□□□ 0.39
CACNA1EQ15878 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA1EQ15878 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.51■□□□□ 0.39
CACNA1EQ15878 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.51■□□□□ 0.39
CACNA1EQ15878 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA1EQ15878 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA1EQ15878 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms