Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.98■□□□□ 0.63
ERVFC1P60507 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
ERVFC1P60507 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ERVFC1P60507 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERVFC1P60507 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.98■□□□□ 0.63
ERVFC1P60507 AL022326.1-202ENST00000641533 845 ntBASIC18.98■□□□□ 0.63
ERVFC1P60507 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERVFC1P60507 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERVFC1P60507 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.98■□□□□ 0.63
ERVFC1P60507 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.98■□□□□ 0.63
ERVFC1P60507 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERVFC1P60507 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERVFC1P60507 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ERVFC1P60507 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.97■□□□□ 0.63
ERVFC1P60507 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ERVFC1P60507 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
ERVFC1P60507 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.97■□□□□ 0.63
ERVFC1P60507 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERVFC1P60507 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERVFC1P60507 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.97■□□□□ 0.63
ERVFC1P60507 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ERVFC1P60507 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERVFC1P60507 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.97■□□□□ 0.63
ERVFC1P60507 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.97■□□□□ 0.63
ERVFC1P60507 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
ERVFC1P60507 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ERVFC1P60507 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ERVFC1P60507 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.97■□□□□ 0.63
ERVFC1P60507 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.97■□□□□ 0.63
ERVFC1P60507 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ERVFC1P60507 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.96■□□□□ 0.63
ERVFC1P60507 AC073621.1-201ENST00000392730 636 ntBASIC18.96■□□□□ 0.63
ERVFC1P60507 KRT18P27-201ENST00000427733 1299 ntBASIC18.96■□□□□ 0.63
ERVFC1P60507 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.96■□□□□ 0.63
ERVFC1P60507 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.96■□□□□ 0.63
ERVFC1P60507 AC002347.1-201ENST00000569543 541 ntBASIC18.96■□□□□ 0.63
ERVFC1P60507 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.96■□□□□ 0.63
ERVFC1P60507 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.96■□□□□ 0.63
ERVFC1P60507 AC079781.4-201ENST00000641908 219 ntBASIC18.96■□□□□ 0.63
ERVFC1P60507 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.96■□□□□ 0.63
ERVFC1P60507 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.96■□□□□ 0.63
ERVFC1P60507 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ERVFC1P60507 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERVFC1P60507 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.96■□□□□ 0.63
ERVFC1P60507 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.95■□□□□ 0.62
ERVFC1P60507 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ERVFC1P60507 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.95■□□□□ 0.62
ERVFC1P60507 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 AC010460.3-201ENST00000511359 1579 ntBASIC18.95■□□□□ 0.62
ERVFC1P60507 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.95■□□□□ 0.62
ERVFC1P60507 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.95■□□□□ 0.62
ERVFC1P60507 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.95■□□□□ 0.62
ERVFC1P60507 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.95■□□□□ 0.62
ERVFC1P60507 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.95■□□□□ 0.62
ERVFC1P60507 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.95■□□□□ 0.62
ERVFC1P60507 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
ERVFC1P60507 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ERVFC1P60507 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ERVFC1P60507 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.95■□□□□ 0.62
ERVFC1P60507 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERVFC1P60507 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERVFC1P60507 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERVFC1P60507 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERVFC1P60507 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERVFC1P60507 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERVFC1P60507 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.94■□□□□ 0.62
ERVFC1P60507 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERVFC1P60507 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERVFC1P60507 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ERVFC1P60507 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.94■□□□□ 0.62
ERVFC1P60507 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.94■□□□□ 0.62
ERVFC1P60507 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.94■□□□□ 0.62
ERVFC1P60507 KRT18P2-201ENST00000447938 1258 ntBASIC18.94■□□□□ 0.62
ERVFC1P60507 DNAJB3-202ENST00000449667 1266 ntBASIC18.94■□□□□ 0.62
ERVFC1P60507 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.94■□□□□ 0.62
ERVFC1P60507 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.94■□□□□ 0.62
ERVFC1P60507 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERVFC1P60507 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.94■□□□□ 0.62
ERVFC1P60507 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms