Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
WNT3P56703 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.12■□□□□ 0.33
WNT3P56703 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WNT3P56703 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
WNT3P56703 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.12■□□□□ 0.33
WNT3P56703 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.12■□□□□ 0.33
WNT3P56703 NTF6B-201ENST00000591913 560 ntBASIC17.12■□□□□ 0.33
WNT3P56703 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
WNT3P56703 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
WNT3P56703 AL590326.2-201ENST00000625139 305 ntBASIC17.12■□□□□ 0.33
WNT3P56703 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WNT3P56703 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
WNT3P56703 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
WNT3P56703 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.12■□□□□ 0.33
WNT3P56703 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
WNT3P56703 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WNT3P56703 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WNT3P56703 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.12■□□□□ 0.33
WNT3P56703 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
WNT3P56703 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.12■□□□□ 0.33
WNT3P56703 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
WNT3P56703 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WNT3P56703 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.12■□□□□ 0.33
WNT3P56703 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.11■□□□□ 0.33
WNT3P56703 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
WNT3P56703 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.11■□□□□ 0.33
WNT3P56703 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
WNT3P56703 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.11■□□□□ 0.33
WNT3P56703 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
WNT3P56703 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.11■□□□□ 0.33
WNT3P56703 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.11■□□□□ 0.33
WNT3P56703 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.11■□□□□ 0.33
WNT3P56703 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
WNT3P56703 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
WNT3P56703 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.11■□□□□ 0.33
WNT3P56703 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
WNT3P56703 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
WNT3P56703 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.11■□□□□ 0.33
WNT3P56703 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
WNT3P56703 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
WNT3P56703 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
WNT3P56703 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
WNT3P56703 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WNT3P56703 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.1■□□□□ 0.33
WNT3P56703 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
WNT3P56703 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.1■□□□□ 0.33
WNT3P56703 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
WNT3P56703 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.1■□□□□ 0.33
WNT3P56703 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.1■□□□□ 0.33
WNT3P56703 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.1■□□□□ 0.33
WNT3P56703 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
WNT3P56703 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.1■□□□□ 0.33
WNT3P56703 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.1■□□□□ 0.33
WNT3P56703 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.1■□□□□ 0.33
WNT3P56703 MIR3917-201ENST00000580971 93 ntBASIC17.1■□□□□ 0.33
WNT3P56703 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.1■□□□□ 0.33
WNT3P56703 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 LINC00167-201ENST00000530583 1419 ntBASIC17.1■□□□□ 0.33
WNT3P56703 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.1■□□□□ 0.33
WNT3P56703 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
WNT3P56703 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3P56703 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.1■□□□□ 0.33
WNT3P56703 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
WNT3P56703 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms