Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.98■□□□□ 0.31
SMSP52788 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMSP52788 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.98■□□□□ 0.31
SMSP52788 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.98■□□□□ 0.31
SMSP52788 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMSP52788 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.98■□□□□ 0.31
SMSP52788 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.98■□□□□ 0.31
SMSP52788 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.98■□□□□ 0.31
SMSP52788 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMSP52788 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMSP52788 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SMSP52788 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMSP52788 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.97■□□□□ 0.31
SMSP52788 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SMSP52788 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 STARP1-201ENST00000397973 869 ntBASIC16.97■□□□□ 0.31
SMSP52788 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.97■□□□□ 0.31
SMSP52788 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.97■□□□□ 0.31
SMSP52788 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.97■□□□□ 0.31
SMSP52788 KRT18P38-201ENST00000449496 1282 ntBASIC16.97■□□□□ 0.31
SMSP52788 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.97■□□□□ 0.31
SMSP52788 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.97■□□□□ 0.31
SMSP52788 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.97■□□□□ 0.31
SMSP52788 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.97■□□□□ 0.31
SMSP52788 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.97■□□□□ 0.31
SMSP52788 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.97■□□□□ 0.31
SMSP52788 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.97■□□□□ 0.31
SMSP52788 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.97■□□□□ 0.31
SMSP52788 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.97■□□□□ 0.31
SMSP52788 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.97■□□□□ 0.31
SMSP52788 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SMSP52788 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SMSP52788 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMSP52788 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SMSP52788 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.96■□□□□ 0.31
SMSP52788 LINC01311-201ENST00000565162 1445 ntBASIC16.96■□□□□ 0.31
SMSP52788 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.96■□□□□ 0.31
SMSP52788 AC135776.1-201ENST00000319817 2481 ntBASIC16.96■□□□□ 0.31
SMSP52788 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.96■□□□□ 0.31
SMSP52788 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.96■□□□□ 0.31
SMSP52788 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.96■□□□□ 0.31
SMSP52788 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
SMSP52788 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.96■□□□□ 0.31
SMSP52788 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.96■□□□□ 0.31
SMSP52788 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.96■□□□□ 0.31
SMSP52788 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.96■□□□□ 0.31
SMSP52788 KRT8P32-201ENST00000512863 1461 ntBASIC16.96■□□□□ 0.31
SMSP52788 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.96■□□□□ 0.31
SMSP52788 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
SMSP52788 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SMSP52788 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SMSP52788 PKD1P1-201ENST00000458669 6805 ntBASIC16.96■□□□□ 0.31
SMSP52788 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMSP52788 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
SMSP52788 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.96■□□□□ 0.3
SMSP52788 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.96■□□□□ 0.3
SMSP52788 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMSP52788 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.96■□□□□ 0.3
SMSP52788 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SMSP52788 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.96■□□□□ 0.3
SMSP52788 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMSP52788 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms