Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TSPY12P-201ENST00000421279 868 ntBASIC16.66■□□□□ 0.26
ABCD3P28288 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ABCD3P28288 TSSC2-201ENST00000450217 709 ntBASIC16.66■□□□□ 0.26
ABCD3P28288 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ABCD3P28288 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.66■□□□□ 0.26
ABCD3P28288 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.66■□□□□ 0.26
ABCD3P28288 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ABCD3P28288 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.66■□□□□ 0.26
ABCD3P28288 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.66■□□□□ 0.26
ABCD3P28288 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ABCD3P28288 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.66■□□□□ 0.26
ABCD3P28288 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.66■□□□□ 0.26
ABCD3P28288 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ABCD3P28288 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.66■□□□□ 0.26
ABCD3P28288 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.66■□□□□ 0.26
ABCD3P28288 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ABCD3P28288 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ABCD3P28288 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ABCD3P28288 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ABCD3P28288 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.66■□□□□ 0.26
ABCD3P28288 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ABCD3P28288 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ABCD3P28288 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.66■□□□□ 0.26
ABCD3P28288 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ABCD3P28288 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
ABCD3P28288 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.65■□□□□ 0.26
ABCD3P28288 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.65■□□□□ 0.26
ABCD3P28288 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ABCD3P28288 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ABCD3P28288 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ABCD3P28288 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 CHCHD2P8-201ENST00000429873 447 ntBASIC16.65■□□□□ 0.26
ABCD3P28288 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.65■□□□□ 0.26
ABCD3P28288 KRT18P65-201ENST00000439811 1286 ntBASIC16.65■□□□□ 0.26
ABCD3P28288 GUSBP12-201ENST00000513727 720 ntBASIC16.65■□□□□ 0.26
ABCD3P28288 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.65■□□□□ 0.26
ABCD3P28288 AC090616.6-201ENST00000582640 721 ntBASIC16.65■□□□□ 0.26
ABCD3P28288 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.65■□□□□ 0.26
ABCD3P28288 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ABCD3P28288 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ABCD3P28288 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 AL354751.1-201ENST00000412768 1863 ntBASIC16.65■□□□□ 0.26
ABCD3P28288 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ABCD3P28288 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
ABCD3P28288 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ABCD3P28288 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.64■□□□□ 0.25
ABCD3P28288 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ABCD3P28288 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.64■□□□□ 0.25
ABCD3P28288 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ABCD3P28288 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ABCD3P28288 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ABCD3P28288 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ABCD3P28288 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ABCD3P28288 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ABCD3P28288 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.64■□□□□ 0.25
ABCD3P28288 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ABCD3P28288 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ABCD3P28288 AC009154.2-201ENST00000621177 724 ntBASIC16.64■□□□□ 0.25
ABCD3P28288 AC093458.2-201ENST00000623150 629 ntBASIC16.64■□□□□ 0.25
ABCD3P28288 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.64■□□□□ 0.25
ABCD3P28288 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ABCD3P28288 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ABCD3P28288 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.64■□□□□ 0.25
ABCD3P28288 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ABCD3P28288 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ABCD3P28288 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.64■□□□□ 0.25
ABCD3P28288 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ABCD3P28288 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ABCD3P28288 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ABCD3P28288 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.64■□□□□ 0.25
ABCD3P28288 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms