Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN1P18031 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPN1P18031 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
PTPN1P18031 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN1P18031 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN1P18031 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN1P18031 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN1P18031 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PTPN1P18031 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PTPN1P18031 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN1P18031 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
PTPN1P18031 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.12■□□□□ 0.65
PTPN1P18031 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN1P18031 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.12■□□□□ 0.65
PTPN1P18031 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN1P18031 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN1P18031 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PTPN1P18031 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
PTPN1P18031 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PTPN1P18031 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 IGHV3-47-201ENST00000425060 335 ntBASIC19.12■□□□□ 0.65
PTPN1P18031 DUSP5P1-201ENST00000441325 1139 ntBASIC19.12■□□□□ 0.65
PTPN1P18031 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.12■□□□□ 0.65
PTPN1P18031 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN1P18031 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.12■□□□□ 0.65
PTPN1P18031 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.12■□□□□ 0.65
PTPN1P18031 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN1P18031 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN1P18031 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN1P18031 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PTPN1P18031 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN1P18031 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN1P18031 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN1P18031 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN1P18031 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PTPN1P18031 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.11■□□□□ 0.65
PTPN1P18031 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN1P18031 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN1P18031 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN1P18031 AC112698.1-201ENST00000510299 916 ntBASIC19.11■□□□□ 0.65
PTPN1P18031 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN1P18031 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN1P18031 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN1P18031 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN1P18031 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PTPN1P18031 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN1P18031 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN1P18031 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.11■□□□□ 0.65
PTPN1P18031 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN1P18031 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms