Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDH1P12830 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH1P12830 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH1P12830 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH1P12830 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH1P12830 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH1P12830 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH1P12830 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH1P12830 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CDH1P12830 AL359075.1-203ENST00000462729 1002 ntBASIC17.65■□□□□ 0.42
CDH1P12830 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH1P12830 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH1P12830 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH1P12830 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDH1P12830 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 AC106820.2-201ENST00000563775 3264 ntBASIC17.65■□□□□ 0.42
CDH1P12830 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CDH1P12830 GNAS-203ENST00000306120 1878 ntBASIC17.65■□□□□ 0.42
CDH1P12830 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH1P12830 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH1P12830 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH1P12830 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDH1P12830 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDH1P12830 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDH1P12830 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDH1P12830 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH1P12830 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 STARP1-201ENST00000397973 869 ntBASIC17.64■□□□□ 0.41
CDH1P12830 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH1P12830 KRT18P38-201ENST00000449496 1282 ntBASIC17.64■□□□□ 0.41
CDH1P12830 AC092647.4-201ENST00000457211 535 ntBASIC17.64■□□□□ 0.41
CDH1P12830 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH1P12830 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CDH1P12830 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CDH1P12830 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH1P12830 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.64■□□□□ 0.41
CDH1P12830 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH1P12830 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH1P12830 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH1P12830 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH1P12830 AC093677.2-201ENST00000600169 1863 ntBASIC17.63■□□□□ 0.41
CDH1P12830 AL024508.2-201ENST00000607749 1894 ntBASIC17.63■□□□□ 0.41
CDH1P12830 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDH1P12830 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH1P12830 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDH1P12830 DUX4L26-201ENST00000489078 1255 ntBASIC17.63■□□□□ 0.41
CDH1P12830 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CDH1P12830 AC079602.3-201ENST00000623931 403 ntBASIC17.63■□□□□ 0.41
CDH1P12830 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH1P12830 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CDH1P12830 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH1P12830 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDH1P12830 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms