Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
BCKDHAP12694 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
BCKDHAP12694 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 DUTP2-201ENST00000519164 463 ntBASIC17.3■□□□□ 0.36
BCKDHAP12694 NAPSB-206ENST00000562112 1266 ntBASIC17.3■□□□□ 0.36
BCKDHAP12694 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
BCKDHAP12694 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
BCKDHAP12694 FAM87A-204ENST00000613235 858 ntBASIC17.3■□□□□ 0.36
BCKDHAP12694 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.3■□□□□ 0.36
BCKDHAP12694 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
BCKDHAP12694 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.3■□□□□ 0.36
BCKDHAP12694 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
BCKDHAP12694 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BCKDHAP12694 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
BCKDHAP12694 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.3■□□□□ 0.36
BCKDHAP12694 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BCKDHAP12694 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.29■□□□□ 0.36
BCKDHAP12694 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BCKDHAP12694 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.29■□□□□ 0.36
BCKDHAP12694 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.29■□□□□ 0.36
BCKDHAP12694 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.29■□□□□ 0.36
BCKDHAP12694 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.29■□□□□ 0.36
BCKDHAP12694 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.29■□□□□ 0.36
BCKDHAP12694 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BCKDHAP12694 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.29■□□□□ 0.36
BCKDHAP12694 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.29■□□□□ 0.36
BCKDHAP12694 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.29■□□□□ 0.36
BCKDHAP12694 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.29■□□□□ 0.36
BCKDHAP12694 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.29■□□□□ 0.36
BCKDHAP12694 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
BCKDHAP12694 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.29■□□□□ 0.36
BCKDHAP12694 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BCKDHAP12694 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.28■□□□□ 0.36
BCKDHAP12694 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 MMP23A-201ENST00000234610 1017 ntBASIC17.28■□□□□ 0.36
BCKDHAP12694 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
BCKDHAP12694 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
BCKDHAP12694 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
BCKDHAP12694 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.28■□□□□ 0.36
BCKDHAP12694 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.28■□□□□ 0.36
BCKDHAP12694 ECEL1P2-202ENST00000465689 757 ntBASIC17.28■□□□□ 0.36
BCKDHAP12694 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BCKDHAP12694 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.28■□□□□ 0.36
BCKDHAP12694 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.28■□□□□ 0.36
BCKDHAP12694 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.28■□□□□ 0.36
BCKDHAP12694 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHAP12694 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.28■□□□□ 0.36
BCKDHAP12694 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.28■□□□□ 0.36
BCKDHAP12694 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms