Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.11■□□□□ 0.49
PDGFBP01127 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PDGFBP01127 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDGFBP01127 AL137060.1-201ENST00000618151 2648 ntBASIC18.1■□□□□ 0.49
PDGFBP01127 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFBP01127 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFBP01127 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.1■□□□□ 0.49
PDGFBP01127 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFBP01127 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
PDGFBP01127 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.1■□□□□ 0.49
PDGFBP01127 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFBP01127 LINC01126-201ENST00000623515 1646 ntBASIC18.1■□□□□ 0.49
PDGFBP01127 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.1■□□□□ 0.49
PDGFBP01127 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDGFBP01127 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDGFBP01127 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.1■□□□□ 0.49
PDGFBP01127 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFBP01127 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PDGFBP01127 GK-202ENST00000378941 458 ntTSL 3 BASIC18.1■□□□□ 0.49
PDGFBP01127 MRPL20P1-201ENST00000400819 433 ntBASIC18.1■□□□□ 0.49
PDGFBP01127 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFBP01127 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.1■□□□□ 0.49
PDGFBP01127 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.1■□□□□ 0.49
PDGFBP01127 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.1■□□□□ 0.49
PDGFBP01127 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.1■□□□□ 0.49
PDGFBP01127 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFBP01127 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFBP01127 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFBP01127 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PDGFBP01127 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFBP01127 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFBP01127 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFBP01127 BCAR1-209ENST00000546196 1340 ntBASIC18.09■□□□□ 0.49
PDGFBP01127 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.09■□□□□ 0.49
PDGFBP01127 SPDYE21P-201ENST00000413323 827 ntBASIC18.09■□□□□ 0.49
PDGFBP01127 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.09■□□□□ 0.49
PDGFBP01127 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDGFBP01127 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.09■□□□□ 0.49
PDGFBP01127 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.09■□□□□ 0.49
PDGFBP01127 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFBP01127 AL390955.2-201ENST00000603032 514 ntBASIC18.09■□□□□ 0.49
PDGFBP01127 AL589182.2-201ENST00000619332 1049 ntBASIC18.09■□□□□ 0.49
PDGFBP01127 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
PDGFBP01127 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDGFBP01127 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFBP01127 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFBP01127 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFBP01127 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.08■□□□□ 0.49
PDGFBP01127 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.08■□□□□ 0.49
PDGFBP01127 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFBP01127 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFBP01127 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFBP01127 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFBP01127 AC063926.2-201ENST00000623766 1308 ntBASIC18.08■□□□□ 0.49
PDGFBP01127 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFBP01127 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFBP01127 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFBP01127 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFBP01127 AC004461.1-201ENST00000412461 403 ntBASIC18.08■□□□□ 0.48
PDGFBP01127 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.08■□□□□ 0.48
PDGFBP01127 IGHV3-65-201ENST00000523210 341 ntBASIC18.08■□□□□ 0.48
PDGFBP01127 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.08■□□□□ 0.48
PDGFBP01127 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.08■□□□□ 0.48
PDGFBP01127 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.08■□□□□ 0.48
PDGFBP01127 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.08■□□□□ 0.48
PDGFBP01127 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.08■□□□□ 0.48
PDGFBP01127 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.08■□□□□ 0.48
PDGFBP01127 AL513210.1-201ENST00000629608 234 ntBASIC18.08■□□□□ 0.48
PDGFBP01127 AC010507.1-201ENST00000633895 436 ntBASIC18.08■□□□□ 0.48
PDGFBP01127 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
PDGFBP01127 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.08■□□□□ 0.48
PDGFBP01127 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFBP01127 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFBP01127 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PDGFBP01127 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
PDGFBP01127 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFBP01127 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.08■□□□□ 0.48
PDGFBP01127 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PDGFBP01127 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFBP01127 SIGLEC16-201ENST00000599858 1437 ntBASIC18.07■□□□□ 0.48
PDGFBP01127 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PDGFBP01127 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFBP01127 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFBP01127 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFBP01127 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms