Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FAM86EP-206ENST00000510506 987 ntBASIC16.9■□□□□ 0.3
TRIM3O75382 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM3O75382 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM3O75382 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM3O75382 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM3O75382 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM3O75382 ANO7L1-203ENST00000602586 1720 ntBASIC16.9■□□□□ 0.3
TRIM3O75382 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM3O75382 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM3O75382 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM3O75382 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
TRIM3O75382 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
TRIM3O75382 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
TRIM3O75382 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.89■□□□□ 0.3
TRIM3O75382 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TRIM3O75382 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TRIM3O75382 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM3O75382 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM3O75382 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM3O75382 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM3O75382 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TRIM3O75382 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM3O75382 HBZP1-201ENST00000354915 429 ntBASIC16.89■□□□□ 0.29
TRIM3O75382 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
TRIM3O75382 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM3O75382 AC092597.1-201ENST00000487352 616 ntBASIC16.89■□□□□ 0.29
TRIM3O75382 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM3O75382 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM3O75382 ZNF444P1-201ENST00000559497 298 ntBASIC16.89■□□□□ 0.29
TRIM3O75382 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRIM3O75382 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM3O75382 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM3O75382 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM3O75382 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM3O75382 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM3O75382 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM3O75382 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM3O75382 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM3O75382 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM3O75382 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM3O75382 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM3O75382 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM3O75382 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM3O75382 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM3O75382 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM3O75382 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM3O75382 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM3O75382 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM3O75382 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM3O75382 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 AC139713.2-201ENST00000641328 2723 ntBASIC16.88■□□□□ 0.29
TRIM3O75382 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM3O75382 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM3O75382 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM3O75382 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM3O75382 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM3O75382 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.88■□□□□ 0.29
TRIM3O75382 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM3O75382 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM3O75382 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 AL136038.3-201ENST00000561909 1096 ntBASIC16.88■□□□□ 0.29
TRIM3O75382 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM3O75382 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
TRIM3O75382 AL358472.4-201ENST00000633140 710 ntBASIC16.88■□□□□ 0.29
TRIM3O75382 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM3O75382 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM3O75382 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM3O75382 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM3O75382 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM3O75382 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM3O75382 KRT8P50-201ENST00000562022 1438 ntBASIC16.87■□□□□ 0.29
TRIM3O75382 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM3O75382 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM3O75382 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM3O75382 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.87■□□□□ 0.29
TRIM3O75382 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms