Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.95■□□□□ 0.3
HCN1O60741 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 PRORSD1P-202ENST00000563365 2154 ntBASIC16.95■□□□□ 0.3
HCN1O60741 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.95■□□□□ 0.3
HCN1O60741 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.95■□□□□ 0.3
HCN1O60741 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.94■□□□□ 0.3
HCN1O60741 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HCN1O60741 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 AC036111.1-201ENST00000533973 1582 ntBASIC16.94■□□□□ 0.3
HCN1O60741 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HCN1O60741 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HCN1O60741 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HCN1O60741 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HCN1O60741 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.94■□□□□ 0.3
HCN1O60741 KRT18P38-201ENST00000449496 1282 ntBASIC16.94■□□□□ 0.3
HCN1O60741 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.94■□□□□ 0.3
HCN1O60741 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.94■□□□□ 0.3
HCN1O60741 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.94■□□□□ 0.3
HCN1O60741 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HCN1O60741 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.94■□□□□ 0.3
HCN1O60741 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.94■□□□□ 0.3
HCN1O60741 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.94■□□□□ 0.3
HCN1O60741 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
HCN1O60741 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
HCN1O60741 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.94■□□□□ 0.3
HCN1O60741 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.94■□□□□ 0.3
HCN1O60741 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.94■□□□□ 0.3
HCN1O60741 AL109659.2-201ENST00000606809 1674 ntBASIC16.94■□□□□ 0.3
HCN1O60741 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.94■□□□□ 0.3
HCN1O60741 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCN1O60741 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HCN1O60741 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HCN1O60741 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HCN1O60741 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.93■□□□□ 0.3
HCN1O60741 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HCN1O60741 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.93■□□□□ 0.3
HCN1O60741 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 FAM86EP-206ENST00000510506 987 ntBASIC16.93■□□□□ 0.3
HCN1O60741 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.93■□□□□ 0.3
HCN1O60741 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.93■□□□□ 0.3
HCN1O60741 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HCN1O60741 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HCN1O60741 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.93■□□□□ 0.3
HCN1O60741 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCN1O60741 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.93■□□□□ 0.3
HCN1O60741 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HCN1O60741 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.92■□□□□ 0.3
HCN1O60741 AL499627.1-201ENST00000569373 2188 ntBASIC16.92■□□□□ 0.3
HCN1O60741 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.92■□□□□ 0.3
HCN1O60741 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.92■□□□□ 0.3
HCN1O60741 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HCN1O60741 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 PCED1CP-201ENST00000419887 785 ntBASIC16.92■□□□□ 0.3
HCN1O60741 AC112907.2-201ENST00000448639 330 ntBASIC16.92■□□□□ 0.3
HCN1O60741 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.92■□□□□ 0.3
HCN1O60741 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.92■□□□□ 0.3
HCN1O60741 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCN1O60741 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.92■□□□□ 0.3
HCN1O60741 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.92■□□□□ 0.3
HCN1O60741 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.92■□□□□ 0.3
HCN1O60741 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms