Protein–RNA interactions for Protein: O60488

ACSL4, Long-chain-fatty-acid--CoA ligase 4, humanhuman

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL4O60488 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACSL4O60488 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACSL4O60488 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ACSL4O60488 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACSL4O60488 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.59■□□□□ 0.57
ACSL4O60488 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ACSL4O60488 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.59■□□□□ 0.57
ACSL4O60488 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.59■□□□□ 0.57
ACSL4O60488 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACSL4O60488 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ACSL4O60488 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ACSL4O60488 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ACSL4O60488 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACSL4O60488 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ACSL4O60488 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACSL4O60488 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ACSL4O60488 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACSL4O60488 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.58■□□□□ 0.56
ACSL4O60488 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
ACSL4O60488 AL450487.1-201ENST00000426799 995 ntBASIC18.58■□□□□ 0.56
ACSL4O60488 FOSL1P1-201ENST00000511041 816 ntBASIC18.58■□□□□ 0.56
ACSL4O60488 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.58■□□□□ 0.56
ACSL4O60488 DUTP2-201ENST00000519164 463 ntBASIC18.58■□□□□ 0.56
ACSL4O60488 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.58■□□□□ 0.56
ACSL4O60488 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.58■□□□□ 0.56
ACSL4O60488 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.58■□□□□ 0.56
ACSL4O60488 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.58■□□□□ 0.56
ACSL4O60488 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.58■□□□□ 0.56
ACSL4O60488 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ACSL4O60488 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACSL4O60488 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.57■□□□□ 0.56
ACSL4O60488 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
ACSL4O60488 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.57■□□□□ 0.56
ACSL4O60488 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.57■□□□□ 0.56
ACSL4O60488 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.57■□□□□ 0.56
ACSL4O60488 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 MINOS1P3-201ENST00000457048 203 ntBASIC18.57■□□□□ 0.56
ACSL4O60488 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.57■□□□□ 0.56
ACSL4O60488 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.57■□□□□ 0.56
ACSL4O60488 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.57■□□□□ 0.56
ACSL4O60488 AC005336.2-201ENST00000593183 939 ntBASIC18.57■□□□□ 0.56
ACSL4O60488 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.57■□□□□ 0.56
ACSL4O60488 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.57■□□□□ 0.56
ACSL4O60488 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.57■□□□□ 0.56
ACSL4O60488 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.57■□□□□ 0.56
ACSL4O60488 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACSL4O60488 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
ACSL4O60488 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.56■□□□□ 0.56
ACSL4O60488 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.56■□□□□ 0.56
ACSL4O60488 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.56■□□□□ 0.56
ACSL4O60488 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACSL4O60488 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ACSL4O60488 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACSL4O60488 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACSL4O60488 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.56■□□□□ 0.56
ACSL4O60488 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACSL4O60488 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ACSL4O60488 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.56■□□□□ 0.56
ACSL4O60488 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.56■□□□□ 0.56
ACSL4O60488 AC138894.3-201ENST00000603787 634 ntBASIC18.56■□□□□ 0.56
ACSL4O60488 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ACSL4O60488 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACSL4O60488 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.56■□□□□ 0.56
ACSL4O60488 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACSL4O60488 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACSL4O60488 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACSL4O60488 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ACSL4O60488 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ACSL4O60488 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms