Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.31■□□□□ 0.36
LCMT2O60294 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.31■□□□□ 0.36
LCMT2O60294 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.31■□□□□ 0.36
LCMT2O60294 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.31■□□□□ 0.36
LCMT2O60294 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.31■□□□□ 0.36
LCMT2O60294 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.31■□□□□ 0.36
LCMT2O60294 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.31■□□□□ 0.36
LCMT2O60294 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LCMT2O60294 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.31■□□□□ 0.36
LCMT2O60294 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.31■□□□□ 0.36
LCMT2O60294 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
LCMT2O60294 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCMT2O60294 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.31■□□□□ 0.36
LCMT2O60294 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LCMT2O60294 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.3■□□□□ 0.36
LCMT2O60294 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.3■□□□□ 0.36
LCMT2O60294 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.3■□□□□ 0.36
LCMT2O60294 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LCMT2O60294 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LCMT2O60294 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.3■□□□□ 0.36
LCMT2O60294 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.3■□□□□ 0.36
LCMT2O60294 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.3■□□□□ 0.36
LCMT2O60294 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.3■□□□□ 0.36
LCMT2O60294 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.3■□□□□ 0.36
LCMT2O60294 TSPY22P-201ENST00000427496 604 ntBASIC17.3■□□□□ 0.36
LCMT2O60294 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.3■□□□□ 0.36
LCMT2O60294 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.3■□□□□ 0.36
LCMT2O60294 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.3■□□□□ 0.36
LCMT2O60294 NOC2LP1-202ENST00000452600 2235 ntBASIC17.3■□□□□ 0.36
LCMT2O60294 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 AC018470.1-201ENST00000624790 3129 ntBASIC17.3■□□□□ 0.36
LCMT2O60294 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LCMT2O60294 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCMT2O60294 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.3■□□□□ 0.36
LCMT2O60294 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.29■□□□□ 0.36
LCMT2O60294 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.29■□□□□ 0.36
LCMT2O60294 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LCMT2O60294 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.29■□□□□ 0.36
LCMT2O60294 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
LCMT2O60294 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.29■□□□□ 0.36
LCMT2O60294 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.29■□□□□ 0.36
LCMT2O60294 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.29■□□□□ 0.36
LCMT2O60294 AP000550.4-202ENST00000639755 178 ntBASIC17.29■□□□□ 0.36
LCMT2O60294 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LCMT2O60294 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.29■□□□□ 0.36
LCMT2O60294 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.29■□□□□ 0.36
LCMT2O60294 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.29■□□□□ 0.36
LCMT2O60294 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.29■□□□□ 0.36
LCMT2O60294 LETM1P2-201ENST00000597330 2178 ntBASIC17.29■□□□□ 0.36
LCMT2O60294 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCMT2O60294 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 IER3-202ENST00000376377 1350 ntBASIC17.28■□□□□ 0.36
LCMT2O60294 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.28■□□□□ 0.36
LCMT2O60294 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.28■□□□□ 0.36
LCMT2O60294 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LCMT2O60294 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LCMT2O60294 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms