Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
PCDH17O14917 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH17O14917 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 SPDYE13P-201ENST00000445314 798 ntBASIC17.29■□□□□ 0.36
PCDH17O14917 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH17O14917 AC092597.1-201ENST00000487352 616 ntBASIC17.29■□□□□ 0.36
PCDH17O14917 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDH17O14917 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
PCDH17O14917 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 KRT89P-201ENST00000620027 1478 ntBASIC17.29■□□□□ 0.36
PCDH17O14917 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.29■□□□□ 0.36
PCDH17O14917 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDH17O14917 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PCDH17O14917 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH17O14917 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
PCDH17O14917 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDH17O14917 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PCDH17O14917 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDH17O14917 AL162741.1-201ENST00000565563 1558 ntBASIC17.28■□□□□ 0.36
PCDH17O14917 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH17O14917 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 FZD10-202ENST00000539839 3282 ntBASIC17.28■□□□□ 0.36
PCDH17O14917 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 MTMR9LP-203ENST00000426597 1545 ntBASIC17.28■□□□□ 0.36
PCDH17O14917 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH17O14917 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH17O14917 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH17O14917 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH17O14917 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH17O14917 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH17O14917 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH17O14917 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDH17O14917 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDH17O14917 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH17O14917 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH17O14917 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH17O14917 AL121672.3-201ENST00000608644 468 ntBASIC17.28■□□□□ 0.36
PCDH17O14917 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH17O14917 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH17O14917 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 AL357033.4-201ENST00000617703 1807 ntBASIC17.28■□□□□ 0.36
PCDH17O14917 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH17O14917 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH17O14917 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH17O14917 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH17O14917 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH17O14917 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH17O14917 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PCDH17O14917 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH17O14917 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDH17O14917 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDH17O14917 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH17O14917 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH17O14917 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDH17O14917 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH17O14917 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH17O14917 AC011498.5-201ENST00000592027 486 ntBASIC17.27■□□□□ 0.36
PCDH17O14917 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH17O14917 AC093458.2-201ENST00000623150 629 ntBASIC17.27■□□□□ 0.36
PCDH17O14917 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH17O14917 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDH17O14917 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDH17O14917 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH17O14917 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH17O14917 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH17O14917 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH17O14917 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH17O14917 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH17O14917 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDH17O14917 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH17O14917 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH17O14917 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH17O14917 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms