Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
APAF1O14727 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
APAF1O14727 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
APAF1O14727 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
APAF1O14727 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
APAF1O14727 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
APAF1O14727 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.82■■□□□ 1.4
APAF1O14727 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.82■■□□□ 1.4
APAF1O14727 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
APAF1O14727 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
APAF1O14727 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.82■■□□□ 1.4
APAF1O14727 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
APAF1O14727 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC23.81■■□□□ 1.4
APAF1O14727 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
APAF1O14727 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
APAF1O14727 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
APAF1O14727 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
APAF1O14727 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
APAF1O14727 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC23.81■■□□□ 1.4
APAF1O14727 AC008764.6-201ENST00000595909 2069 ntBASIC23.81■■□□□ 1.4
APAF1O14727 RNF146-204ENST00000476956 884 ntTSL 2 BASIC23.81■■□□□ 1.4
APAF1O14727 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
APAF1O14727 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.81■■□□□ 1.4
APAF1O14727 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.81■■□□□ 1.4
APAF1O14727 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
APAF1O14727 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
APAF1O14727 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC23.81■■□□□ 1.4
APAF1O14727 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
APAF1O14727 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC23.81■■□□□ 1.4
APAF1O14727 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.81■■□□□ 1.4
APAF1O14727 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
APAF1O14727 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
APAF1O14727 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC23.81■■□□□ 1.4
APAF1O14727 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
APAF1O14727 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
APAF1O14727 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
APAF1O14727 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
APAF1O14727 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
APAF1O14727 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
APAF1O14727 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.8■■□□□ 1.4
APAF1O14727 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.8■■□□□ 1.4
APAF1O14727 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
APAF1O14727 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.8■■□□□ 1.4
APAF1O14727 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
APAF1O14727 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.8■■□□□ 1.4
APAF1O14727 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.8■■□□□ 1.4
APAF1O14727 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
APAF1O14727 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC23.8■■□□□ 1.4
APAF1O14727 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
APAF1O14727 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
APAF1O14727 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
APAF1O14727 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
APAF1O14727 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
APAF1O14727 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
APAF1O14727 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC23.8■■□□□ 1.4
APAF1O14727 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
APAF1O14727 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
APAF1O14727 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
APAF1O14727 IER3-202ENST00000376377 1350 ntBASIC23.79■■□□□ 1.4
APAF1O14727 AC016734.2-201ENST00000624325 1377 ntBASIC23.79■■□□□ 1.4
APAF1O14727 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
APAF1O14727 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
APAF1O14727 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
APAF1O14727 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
APAF1O14727 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
APAF1O14727 TSPY12P-201ENST00000421279 868 ntBASIC23.79■■□□□ 1.4
APAF1O14727 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.79■■□□□ 1.4
APAF1O14727 KRT18P65-201ENST00000439811 1286 ntBASIC23.79■■□□□ 1.4
APAF1O14727 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
APAF1O14727 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
APAF1O14727 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
APAF1O14727 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC23.79■■□□□ 1.4
APAF1O14727 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
APAF1O14727 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
APAF1O14727 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC23.79■■□□□ 1.4
APAF1O14727 AC068880.1-201ENST00000507289 2297 ntBASIC23.79■■□□□ 1.4
APAF1O14727 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
APAF1O14727 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
APAF1O14727 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC23.78■■□□□ 1.4
APAF1O14727 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC23.78■■□□□ 1.4
APAF1O14727 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
APAF1O14727 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms