Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.57■□□□□ 0.4
UBFD1O14562 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.57■□□□□ 0.4
UBFD1O14562 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBFD1O14562 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.56■□□□□ 0.4
UBFD1O14562 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
UBFD1O14562 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.56■□□□□ 0.4
UBFD1O14562 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.56■□□□□ 0.4
UBFD1O14562 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 AC106820.2-201ENST00000563775 3264 ntBASIC17.56■□□□□ 0.4
UBFD1O14562 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.56■□□□□ 0.4
UBFD1O14562 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.56■□□□□ 0.4
UBFD1O14562 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.56■□□□□ 0.4
UBFD1O14562 AC010947.1-201ENST00000623454 693 ntBASIC17.56■□□□□ 0.4
UBFD1O14562 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
UBFD1O14562 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.56■□□□□ 0.4
UBFD1O14562 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
UBFD1O14562 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.56■□□□□ 0.4
UBFD1O14562 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.56■□□□□ 0.4
UBFD1O14562 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
UBFD1O14562 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
UBFD1O14562 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.56■□□□□ 0.4
UBFD1O14562 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBFD1O14562 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.56■□□□□ 0.4
UBFD1O14562 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 AC009053.2-201ENST00000563701 2365 ntBASIC17.55■□□□□ 0.4
UBFD1O14562 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBFD1O14562 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBFD1O14562 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.55■□□□□ 0.4
UBFD1O14562 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.55■□□□□ 0.4
UBFD1O14562 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.55■□□□□ 0.4
UBFD1O14562 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 AC009947.2-201ENST00000444014 672 ntBASIC17.55■□□□□ 0.4
UBFD1O14562 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
UBFD1O14562 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.55■□□□□ 0.4
UBFD1O14562 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.55■□□□□ 0.4
UBFD1O14562 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBFD1O14562 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.55■□□□□ 0.4
UBFD1O14562 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UBFD1O14562 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.55■□□□□ 0.4
UBFD1O14562 LINC00167-201ENST00000530583 1419 ntBASIC17.55■□□□□ 0.4
UBFD1O14562 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBFD1O14562 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBFD1O14562 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UBFD1O14562 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.55■□□□□ 0.4
UBFD1O14562 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.54■□□□□ 0.4
UBFD1O14562 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBFD1O14562 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.54■□□□□ 0.4
UBFD1O14562 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBFD1O14562 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBFD1O14562 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
UBFD1O14562 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms