Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.62■□□□□ 0.57
DFFAO00273 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.62■□□□□ 0.57
DFFAO00273 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
DFFAO00273 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.62■□□□□ 0.57
DFFAO00273 AC087388.1-201ENST00000571370 1112 ntBASIC18.62■□□□□ 0.57
DFFAO00273 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.62■□□□□ 0.57
DFFAO00273 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.62■□□□□ 0.57
DFFAO00273 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.62■□□□□ 0.57
DFFAO00273 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
DFFAO00273 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.62■□□□□ 0.57
DFFAO00273 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DFFAO00273 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DFFAO00273 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
DFFAO00273 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.61■□□□□ 0.57
DFFAO00273 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
DFFAO00273 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.61■□□□□ 0.57
DFFAO00273 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DFFAO00273 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DFFAO00273 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DFFAO00273 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DFFAO00273 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.61■□□□□ 0.57
DFFAO00273 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DFFAO00273 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
DFFAO00273 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.61■□□□□ 0.57
DFFAO00273 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.61■□□□□ 0.57
DFFAO00273 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.61■□□□□ 0.57
DFFAO00273 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.61■□□□□ 0.57
DFFAO00273 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DFFAO00273 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.61■□□□□ 0.57
DFFAO00273 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
DFFAO00273 LINC00602-201ENST00000629776 2065 ntBASIC18.61■□□□□ 0.57
DFFAO00273 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.61■□□□□ 0.57
DFFAO00273 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DFFAO00273 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
DFFAO00273 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DFFAO00273 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 AC093010.1-201ENST00000473625 1624 ntBASIC18.6■□□□□ 0.57
DFFAO00273 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.6■□□□□ 0.57
DFFAO00273 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.6■□□□□ 0.57
DFFAO00273 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 MIR662-201ENST00000384847 95 ntBASIC18.6■□□□□ 0.57
DFFAO00273 SPDYE13P-201ENST00000445314 798 ntBASIC18.6■□□□□ 0.57
DFFAO00273 AP003733.1-201ENST00000491725 852 ntBASIC18.6■□□□□ 0.57
DFFAO00273 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.6■□□□□ 0.57
DFFAO00273 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.6■□□□□ 0.57
DFFAO00273 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DFFAO00273 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.6■□□□□ 0.57
DFFAO00273 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
DFFAO00273 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DFFAO00273 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DFFAO00273 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DFFAO00273 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
DFFAO00273 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.6■□□□□ 0.57
DFFAO00273 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.59■□□□□ 0.57
DFFAO00273 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DFFAO00273 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
DFFAO00273 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DFFAO00273 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DFFAO00273 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.59■□□□□ 0.57
DFFAO00273 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DFFAO00273 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DFFAO00273 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DFFAO00273 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DFFAO00273 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DFFAO00273 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DFFAO00273 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DFFAO00273 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.59■□□□□ 0.57
DFFAO00273 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.59■□□□□ 0.57
DFFAO00273 AL031133.1-201ENST00000406807 723 ntBASIC18.59■□□□□ 0.57
DFFAO00273 MIR1224-201ENST00000408193 85 ntBASIC18.59■□□□□ 0.57
DFFAO00273 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.59■□□□□ 0.57
DFFAO00273 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.59■□□□□ 0.57
DFFAO00273 AC010331.1-201ENST00000611423 582 ntBASIC18.59■□□□□ 0.57
DFFAO00273 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DFFAO00273 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.59■□□□□ 0.57
DFFAO00273 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms