Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 KRASP1-201ENST00000407852 552 ntBASIC15.79■□□□□ 0.12
SHISA3A0PJX4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 MCCD1P1-208ENST00000445732 328 ntBASIC15.79■□□□□ 0.12
SHISA3A0PJX4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHISA3A0PJX4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 AC036111.1-201ENST00000533973 1582 ntBASIC15.78■□□□□ 0.12
SHISA3A0PJX4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHISA3A0PJX4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 AC069152.1-201ENST00000438030 544 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms