Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SPDYE15P-201ENST00000424157 909 ntBASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 RASA4DP-201ENST00000460726 1199 ntBASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AL136038.3-201ENST00000561909 1096 ntBASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC135776.1-201ENST00000319817 2481 ntBASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC005332.1-201ENST00000577698 1310 ntBASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC067852.2-201ENST00000590513 2313 ntBASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC112497.1-201ENST00000624824 639 ntBASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TCRBV4S1A1TA0A5B7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AP000997.3-201ENST00000623333 2250 ntBASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms