Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV9S1A1TA0A576 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 AC010240.3-201ENST00000607688 395 ntBASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 AP000525.1-201ENST00000608286 694 ntBASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV9S1A1TA0A576 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 AL390955.1-201ENST00000428694 934 ntBASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 FITM1-202ENST00000559294 800 ntBASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 AC116562.4-202ENST00000641738 218 ntBASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.21■□□□□ 0.51
TCRBV9S1A1TA0A576 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms