Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 TSPY12P-201ENST00000421279 868 ntBASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 TOB2P1-201ENST00000469761 992 ntBASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 AP000867.3-201ENST00000524675 377 ntBASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 TPSP2-201ENST00000561760 610 ntBASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 MIR3652-201ENST00000579335 131 ntBASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC093503.3-201ENST00000624917 2352 ntBASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 OR6D1P-202ENST00000641007 5290 ntBASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGHV4-28A0A0C4DH34 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC004408.2-201ENST00000623613 2777 ntBASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 DRAXINP1-201ENST00000437611 948 ntBASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 PRELID1P1-202ENST00000567272 903 ntBASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 WIZP1-201ENST00000531444 2299 ntBASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IGHV4-28A0A0C4DH34 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms