Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-3A0A0A0MS03 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV5-3A0A0A0MS03 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-3A0A0A0MS03 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV5-3A0A0A0MS03 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 INGX-201ENST00000359239 846 ntBASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 HLA-J-201ENST00000462773 1622 ntBASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 AC022898.2-201ENST00000616822 1312 ntBASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRBV5-3A0A0A0MS03 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 REXO1L11P-201ENST00000620964 1927 ntBASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-3A0A0A0MS03 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 TSPY7P-201ENST00000431358 1114 ntBASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 C2orf69P3-201ENST00000565542 1120 ntBASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 MIR3917-201ENST00000580971 93 ntBASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV5-3A0A0A0MS03 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms