Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 AC104390.1-201ENST00000555663 520 ntBASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 REXO1L9P-201ENST00000604264 2108 ntBASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 AC093677.2-201ENST00000600169 1863 ntBASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 FLJ16779-201ENST00000612722 7638 ntBASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 AC010240.3-201ENST00000607688 395 ntBASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 AC092865.7-201ENST00000641832 219 ntBASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV1A0A0A0MS02 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 SDHAP2-201ENST00000455183 2001 ntBASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV1A0A0A0MS02 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms