Protein–RNA interactions for Protein: S4R325

URGCP-MRPS24, URGCP-MRPS24 readthrough, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URGCP-MRPS24S4R325 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
URGCP-MRPS24S4R325 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
URGCP-MRPS24S4R325 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
URGCP-MRPS24S4R325 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
URGCP-MRPS24S4R325 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
URGCP-MRPS24S4R325 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.26■□□□□ 0.67
URGCP-MRPS24S4R325 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
URGCP-MRPS24S4R325 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 CLDN5-201ENST00000403084 2357 ntBASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
URGCP-MRPS24S4R325 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.24■□□□□ 0.67
URGCP-MRPS24S4R325 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
URGCP-MRPS24S4R325 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
URGCP-MRPS24S4R325 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
URGCP-MRPS24S4R325 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
URGCP-MRPS24S4R325 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
URGCP-MRPS24S4R325 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
URGCP-MRPS24S4R325 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.23■□□□□ 0.67
URGCP-MRPS24S4R325 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
URGCP-MRPS24S4R325 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.23■□□□□ 0.67
URGCP-MRPS24S4R325 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.23■□□□□ 0.67
URGCP-MRPS24S4R325 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
URGCP-MRPS24S4R325 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
URGCP-MRPS24S4R325 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
URGCP-MRPS24S4R325 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
URGCP-MRPS24S4R325 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
URGCP-MRPS24S4R325 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
URGCP-MRPS24S4R325 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
URGCP-MRPS24S4R325 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
URGCP-MRPS24S4R325 AC092803.2-201ENST00000564287 1899 ntBASIC19.22■□□□□ 0.67
URGCP-MRPS24S4R325 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
URGCP-MRPS24S4R325 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
URGCP-MRPS24S4R325 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
URGCP-MRPS24S4R325 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
URGCP-MRPS24S4R325 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.21■□□□□ 0.67
URGCP-MRPS24S4R325 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
URGCP-MRPS24S4R325 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
URGCP-MRPS24S4R325 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
URGCP-MRPS24S4R325 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
URGCP-MRPS24S4R325 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
URGCP-MRPS24S4R325 AP002365.1-201ENST00000603448 772 ntBASIC19.2■□□□□ 0.66
URGCP-MRPS24S4R325 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
URGCP-MRPS24S4R325 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.19■□□□□ 0.66
URGCP-MRPS24S4R325 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
URGCP-MRPS24S4R325 LINC00543-201ENST00000567234 1845 ntBASIC19.19■□□□□ 0.66
URGCP-MRPS24S4R325 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.19■□□□□ 0.66
URGCP-MRPS24S4R325 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
URGCP-MRPS24S4R325 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
URGCP-MRPS24S4R325 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
URGCP-MRPS24S4R325 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
URGCP-MRPS24S4R325 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
URGCP-MRPS24S4R325 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.18■□□□□ 0.66
URGCP-MRPS24S4R325 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
URGCP-MRPS24S4R325 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
URGCP-MRPS24S4R325 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.18■□□□□ 0.66
URGCP-MRPS24S4R325 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
URGCP-MRPS24S4R325 DYNLL1-208ENST00000550178 581 ntBASIC19.18■□□□□ 0.66
URGCP-MRPS24S4R325 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
URGCP-MRPS24S4R325 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
URGCP-MRPS24S4R325 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
URGCP-MRPS24S4R325 AC079834.2-201ENST00000609776 1949 ntBASIC19.17■□□□□ 0.66
URGCP-MRPS24S4R325 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
URGCP-MRPS24S4R325 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
URGCP-MRPS24S4R325 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
URGCP-MRPS24S4R325 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
URGCP-MRPS24S4R325 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
URGCP-MRPS24S4R325 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
URGCP-MRPS24S4R325 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
URGCP-MRPS24S4R325 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
URGCP-MRPS24S4R325 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
URGCP-MRPS24S4R325 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
URGCP-MRPS24S4R325 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
URGCP-MRPS24S4R325 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
URGCP-MRPS24S4R325 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
URGCP-MRPS24S4R325 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
URGCP-MRPS24S4R325 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
URGCP-MRPS24S4R325 AP004833.2-201ENST00000532228 1454 ntBASIC19.15■□□□□ 0.66
URGCP-MRPS24S4R325 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
URGCP-MRPS24S4R325 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URGCP-MRPS24S4R325 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URGCP-MRPS24S4R325 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URGCP-MRPS24S4R325 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URGCP-MRPS24S4R325 AC010864.1-201ENST00000609407 1511 ntBASIC19.13■□□□□ 0.65
URGCP-MRPS24S4R325 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
URGCP-MRPS24S4R325 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URGCP-MRPS24S4R325 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.13■□□□□ 0.65
URGCP-MRPS24S4R325 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URGCP-MRPS24S4R325 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URGCP-MRPS24S4R325 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.12■□□□□ 0.65
URGCP-MRPS24S4R325 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.12■□□□□ 0.65
URGCP-MRPS24S4R325 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms