Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDHGA11Q9Y5H2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGA11Q9Y5H2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PCDHGA11Q9Y5H2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGA11Q9Y5H2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA11Q9Y5H2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA11Q9Y5H2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA11Q9Y5H2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.89■■□□□ 1.42
PCDHGA11Q9Y5H2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGA11Q9Y5H2 AC148477.6-201ENST00000623746 465 ntBASIC23.89■■□□□ 1.41
PCDHGA11Q9Y5H2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.89■■□□□ 1.41
PCDHGA11Q9Y5H2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
PCDHGA11Q9Y5H2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGA11Q9Y5H2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA11Q9Y5H2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHGA11Q9Y5H2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
PCDHGA11Q9Y5H2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHGA11Q9Y5H2 CR559946.2-201ENST00000623684 991 ntBASIC23.88■■□□□ 1.41
PCDHGA11Q9Y5H2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA11Q9Y5H2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PCDHGA11Q9Y5H2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA11Q9Y5H2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA11Q9Y5H2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHGA11Q9Y5H2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGA11Q9Y5H2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGA11Q9Y5H2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
PCDHGA11Q9Y5H2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PCDHGA11Q9Y5H2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PCDHGA11Q9Y5H2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHGA11Q9Y5H2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA11Q9Y5H2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHGA11Q9Y5H2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA11Q9Y5H2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PCDHGA11Q9Y5H2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA11Q9Y5H2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PCDHGA11Q9Y5H2 MIR219A2-201ENST00000608502 1504 ntBASIC23.85■■□□□ 1.41
PCDHGA11Q9Y5H2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA11Q9Y5H2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHGA11Q9Y5H2 MIR3648-2-201ENST00000581792 180 ntBASIC23.85■■□□□ 1.41
PCDHGA11Q9Y5H2 MIR3648-1-201ENST00000615959 180 ntBASIC23.85■■□□□ 1.41
PCDHGA11Q9Y5H2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA11Q9Y5H2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA11Q9Y5H2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHGA11Q9Y5H2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA11Q9Y5H2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA11Q9Y5H2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA11Q9Y5H2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHGA11Q9Y5H2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA11Q9Y5H2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHGA11Q9Y5H2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.84■■□□□ 1.41
PCDHGA11Q9Y5H2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA11Q9Y5H2 AP004609.3-201ENST00000610705 1884 ntBASIC23.83■■□□□ 1.41
PCDHGA11Q9Y5H2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGA11Q9Y5H2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHGA11Q9Y5H2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGA11Q9Y5H2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PCDHGA11Q9Y5H2 HLA-V-202ENST00000446817 847 ntBASIC23.82■■□□□ 1.4
PCDHGA11Q9Y5H2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHGA11Q9Y5H2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA11Q9Y5H2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PCDHGA11Q9Y5H2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA11Q9Y5H2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHGA11Q9Y5H2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA11Q9Y5H2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PCDHGA11Q9Y5H2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PCDHGA11Q9Y5H2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA11Q9Y5H2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PCDHGA11Q9Y5H2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA11Q9Y5H2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA11Q9Y5H2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA11Q9Y5H2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA11Q9Y5H2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA11Q9Y5H2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA11Q9Y5H2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA11Q9Y5H2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA11Q9Y5H2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PCDHGA11Q9Y5H2 AC142472.1-201ENST00000612013 1741 ntBASIC23.79■■□□□ 1.4
PCDHGA11Q9Y5H2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA11Q9Y5H2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHGA11Q9Y5H2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA11Q9Y5H2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA11Q9Y5H2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
PCDHGA11Q9Y5H2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.77■■□□□ 1.4
PCDHGA11Q9Y5H2 AC016575.1-201ENST00000607026 382 ntBASIC23.77■■□□□ 1.4
PCDHGA11Q9Y5H2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHGA11Q9Y5H2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHGA11Q9Y5H2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA11Q9Y5H2 MIR7108-201ENST00000614319 87 ntBASIC23.76■■□□□ 1.39
PCDHGA11Q9Y5H2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHGA11Q9Y5H2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA11Q9Y5H2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHGA11Q9Y5H2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
PCDHGA11Q9Y5H2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.75■■□□□ 1.39
PCDHGA11Q9Y5H2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA11Q9Y5H2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA11Q9Y5H2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA11Q9Y5H2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA11Q9Y5H2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHGA11Q9Y5H2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHGA11Q9Y5H2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms