Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.14■□□□□ 0.33
UBE2D4Q9Y2X8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2D4Q9Y2X8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2D4Q9Y2X8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2D4Q9Y2X8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2D4Q9Y2X8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2D4Q9Y2X8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.12■□□□□ 0.33
UBE2D4Q9Y2X8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.12■□□□□ 0.33
UBE2D4Q9Y2X8 AC093323.1-202ENST00000635031 2045 ntBASIC17.12■□□□□ 0.33
UBE2D4Q9Y2X8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2D4Q9Y2X8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2D4Q9Y2X8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2D4Q9Y2X8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2D4Q9Y2X8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.11■□□□□ 0.33
UBE2D4Q9Y2X8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2D4Q9Y2X8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D4Q9Y2X8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D4Q9Y2X8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D4Q9Y2X8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D4Q9Y2X8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D4Q9Y2X8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.09■□□□□ 0.33
UBE2D4Q9Y2X8 WHAMMP3-201ENST00000611636 1609 ntBASIC17.09■□□□□ 0.33
UBE2D4Q9Y2X8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
UBE2D4Q9Y2X8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.09■□□□□ 0.33
UBE2D4Q9Y2X8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D4Q9Y2X8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2D4Q9Y2X8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2D4Q9Y2X8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.08■□□□□ 0.33
UBE2D4Q9Y2X8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.08■□□□□ 0.33
UBE2D4Q9Y2X8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2D4Q9Y2X8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2D4Q9Y2X8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.08■□□□□ 0.32
UBE2D4Q9Y2X8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2D4Q9Y2X8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2D4Q9Y2X8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2D4Q9Y2X8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D4Q9Y2X8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D4Q9Y2X8 AC110285.7-201ENST00000624417 1536 ntBASIC17.07■□□□□ 0.32
UBE2D4Q9Y2X8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2D4Q9Y2X8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D4Q9Y2X8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D4Q9Y2X8 DUX4L28-201ENST00000623687 678 ntBASIC17.07■□□□□ 0.32
UBE2D4Q9Y2X8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D4Q9Y2X8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D4Q9Y2X8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D4Q9Y2X8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2D4Q9Y2X8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2D4Q9Y2X8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2D4Q9Y2X8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2D4Q9Y2X8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
UBE2D4Q9Y2X8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
UBE2D4Q9Y2X8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2D4Q9Y2X8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
UBE2D4Q9Y2X8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2D4Q9Y2X8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.05■□□□□ 0.32
UBE2D4Q9Y2X8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2D4Q9Y2X8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2D4Q9Y2X8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2D4Q9Y2X8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBE2D4Q9Y2X8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2D4Q9Y2X8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2D4Q9Y2X8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2D4Q9Y2X8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
UBE2D4Q9Y2X8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UBE2D4Q9Y2X8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2D4Q9Y2X8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2D4Q9Y2X8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2D4Q9Y2X8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2D4Q9Y2X8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D4Q9Y2X8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.02■□□□□ 0.32
UBE2D4Q9Y2X8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D4Q9Y2X8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UBE2D4Q9Y2X8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D4Q9Y2X8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D4Q9Y2X8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
UBE2D4Q9Y2X8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D4Q9Y2X8 ERN1-208ENST00000606895 2068 ntBASIC17.02■□□□□ 0.32
UBE2D4Q9Y2X8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms