Protein–RNA interactions for Protein: Q9UQV4

LAMP3, Lysosome-associated membrane glycoprotein 3, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3Q9UQV4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LAMP3Q9UQV4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.39■■□□□ 1.01
LAMP3Q9UQV4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LAMP3Q9UQV4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LAMP3Q9UQV4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LAMP3Q9UQV4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LAMP3Q9UQV4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LAMP3Q9UQV4 SMPD5-203ENST00000639008 1464 ntBASIC21.38■■□□□ 1.01
LAMP3Q9UQV4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.37■■□□□ 1.01
LAMP3Q9UQV4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LAMP3Q9UQV4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.37■■□□□ 1.01
LAMP3Q9UQV4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LAMP3Q9UQV4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.37■■□□□ 1.01
LAMP3Q9UQV4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LAMP3Q9UQV4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.37■■□□□ 1.01
LAMP3Q9UQV4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.37■■□□□ 1.01
LAMP3Q9UQV4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 AL139393.2-201ENST00000608721 2025 ntBASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 AC133552.2-201ENST00000619106 1032 ntBASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.36■■□□□ 1.01
LAMP3Q9UQV4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.35■■□□□ 1.01
LAMP3Q9UQV4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LAMP3Q9UQV4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.35■■□□□ 1.01
LAMP3Q9UQV4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.34■■□□□ 1.01
LAMP3Q9UQV4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LAMP3Q9UQV4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
LAMP3Q9UQV4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LAMP3Q9UQV4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LAMP3Q9UQV4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.34■■□□□ 1.01
LAMP3Q9UQV4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.34■■□□□ 1.01
LAMP3Q9UQV4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LAMP3Q9UQV4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
LAMP3Q9UQV4 AL592293.1-201ENST00000502889 1188 ntBASIC21.33■■□□□ 1.01
LAMP3Q9UQV4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.33■■□□□ 1.01
LAMP3Q9UQV4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
LAMP3Q9UQV4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LAMP3Q9UQV4 AC009831.1-201ENST00000580420 1582 ntBASIC21.32■■□□□ 1
LAMP3Q9UQV4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LAMP3Q9UQV4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LAMP3Q9UQV4 AC129492.7-201ENST00000622992 756 ntBASIC21.32■■□□□ 1
LAMP3Q9UQV4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.32■■□□□ 1
LAMP3Q9UQV4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LAMP3Q9UQV4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LAMP3Q9UQV4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.32■■□□□ 1
LAMP3Q9UQV4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.31■■□□□ 1
LAMP3Q9UQV4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LAMP3Q9UQV4 DUX4L18-201ENST00000553347 1267 ntBASIC21.31■■□□□ 1
LAMP3Q9UQV4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.31■■□□□ 1
LAMP3Q9UQV4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LAMP3Q9UQV4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.3■■□□□ 1
LAMP3Q9UQV4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LAMP3Q9UQV4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LAMP3Q9UQV4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LAMP3Q9UQV4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMP3Q9UQV4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.29■■□□□ 1
LAMP3Q9UQV4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LAMP3Q9UQV4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMP3Q9UQV4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.29■■□□□ 1
LAMP3Q9UQV4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMP3Q9UQV4 RARRES2P1-201ENST00000474487 481 ntBASIC21.28■■□□□ 1
LAMP3Q9UQV4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMP3Q9UQV4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMP3Q9UQV4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMP3Q9UQV4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMP3Q9UQV4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMP3Q9UQV4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.27■■□□□ 1
LAMP3Q9UQV4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.27■■□□□ 1
LAMP3Q9UQV4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.27■■□□□ 1
LAMP3Q9UQV4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.27■■□□□ 1
LAMP3Q9UQV4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LAMP3Q9UQV4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LAMP3Q9UQV4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LAMP3Q9UQV4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LAMP3Q9UQV4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LAMP3Q9UQV4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.26■□□□□ 0.99
LAMP3Q9UQV4 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.26■□□□□ 0.99
LAMP3Q9UQV4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LAMP3Q9UQV4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMP3Q9UQV4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LAMP3Q9UQV4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.25■□□□□ 0.99
LAMP3Q9UQV4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMP3Q9UQV4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LAMP3Q9UQV4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.25■□□□□ 0.99
LAMP3Q9UQV4 AC026202.3-201ENST00000600805 1127 ntBASIC21.25■□□□□ 0.99
LAMP3Q9UQV4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.25■□□□□ 0.99
LAMP3Q9UQV4 AC025884.2-201ENST00000553429 711 ntBASIC21.24■□□□□ 0.99
LAMP3Q9UQV4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LAMP3Q9UQV4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LAMP3Q9UQV4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.23■□□□□ 0.99
LAMP3Q9UQV4 RP9P-202ENST00000450133 1212 ntBASIC21.23■□□□□ 0.99
LAMP3Q9UQV4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms