Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GTF2A1LQ9UNN4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.82■■□□□ 1.08
GTF2A1LQ9UNN4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
GTF2A1LQ9UNN4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
GTF2A1LQ9UNN4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.82■■□□□ 1.08
GTF2A1LQ9UNN4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
GTF2A1LQ9UNN4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.81■■□□□ 1.08
GTF2A1LQ9UNN4 AP004609.3-201ENST00000610705 1884 ntBASIC21.81■■□□□ 1.08
GTF2A1LQ9UNN4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.81■■□□□ 1.08
GTF2A1LQ9UNN4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
GTF2A1LQ9UNN4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GTF2A1LQ9UNN4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GTF2A1LQ9UNN4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
GTF2A1LQ9UNN4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.79■■□□□ 1.08
GTF2A1LQ9UNN4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GTF2A1LQ9UNN4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.79■■□□□ 1.08
GTF2A1LQ9UNN4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
GTF2A1LQ9UNN4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
GTF2A1LQ9UNN4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GTF2A1LQ9UNN4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GTF2A1LQ9UNN4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GTF2A1LQ9UNN4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.77■■□□□ 1.08
GTF2A1LQ9UNN4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
GTF2A1LQ9UNN4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF2A1LQ9UNN4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GTF2A1LQ9UNN4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF2A1LQ9UNN4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GTF2A1LQ9UNN4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.76■■□□□ 1.07
GTF2A1LQ9UNN4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.76■■□□□ 1.07
GTF2A1LQ9UNN4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
GTF2A1LQ9UNN4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.76■■□□□ 1.07
GTF2A1LQ9UNN4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GTF2A1LQ9UNN4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GTF2A1LQ9UNN4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
GTF2A1LQ9UNN4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.75■■□□□ 1.07
GTF2A1LQ9UNN4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
GTF2A1LQ9UNN4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.75■■□□□ 1.07
GTF2A1LQ9UNN4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GTF2A1LQ9UNN4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GTF2A1LQ9UNN4 DUX4L29-201ENST00000425409 679 ntBASIC21.74■■□□□ 1.07
GTF2A1LQ9UNN4 AC021231.2-201ENST00000594613 730 ntBASIC21.74■■□□□ 1.07
GTF2A1LQ9UNN4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GTF2A1LQ9UNN4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GTF2A1LQ9UNN4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GTF2A1LQ9UNN4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GTF2A1LQ9UNN4 AC135731.1-201ENST00000569415 2548 ntBASIC21.73■■□□□ 1.07
GTF2A1LQ9UNN4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GTF2A1LQ9UNN4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
GTF2A1LQ9UNN4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.73■■□□□ 1.07
GTF2A1LQ9UNN4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.73■■□□□ 1.07
GTF2A1LQ9UNN4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
GTF2A1LQ9UNN4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
GTF2A1LQ9UNN4 AC145676.1-201ENST00000514988 2004 ntBASIC21.72■■□□□ 1.07
GTF2A1LQ9UNN4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GTF2A1LQ9UNN4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GTF2A1LQ9UNN4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.72■■□□□ 1.07
GTF2A1LQ9UNN4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GTF2A1LQ9UNN4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GTF2A1LQ9UNN4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.72■■□□□ 1.07
GTF2A1LQ9UNN4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GTF2A1LQ9UNN4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GTF2A1LQ9UNN4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GTF2A1LQ9UNN4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GTF2A1LQ9UNN4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.7■■□□□ 1.06
GTF2A1LQ9UNN4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
GTF2A1LQ9UNN4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
GTF2A1LQ9UNN4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GTF2A1LQ9UNN4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
GTF2A1LQ9UNN4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GTF2A1LQ9UNN4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.7■■□□□ 1.06
GTF2A1LQ9UNN4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.7■■□□□ 1.06
GTF2A1LQ9UNN4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GTF2A1LQ9UNN4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GTF2A1LQ9UNN4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GTF2A1LQ9UNN4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GTF2A1LQ9UNN4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GTF2A1LQ9UNN4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.69■■□□□ 1.06
GTF2A1LQ9UNN4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GTF2A1LQ9UNN4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
GTF2A1LQ9UNN4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GTF2A1LQ9UNN4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GTF2A1LQ9UNN4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.67■■□□□ 1.06
GTF2A1LQ9UNN4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GTF2A1LQ9UNN4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.67■■□□□ 1.06
GTF2A1LQ9UNN4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
GTF2A1LQ9UNN4 AC092803.2-201ENST00000564287 1899 ntBASIC21.66■■□□□ 1.06
GTF2A1LQ9UNN4 WHAMMP3-201ENST00000611636 1609 ntBASIC21.66■■□□□ 1.06
GTF2A1LQ9UNN4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GTF2A1LQ9UNN4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.66■■□□□ 1.06
GTF2A1LQ9UNN4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.66■■□□□ 1.06
GTF2A1LQ9UNN4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GTF2A1LQ9UNN4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF2A1LQ9UNN4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GTF2A1LQ9UNN4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.65■■□□□ 1.06
GTF2A1LQ9UNN4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF2A1LQ9UNN4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
GTF2A1LQ9UNN4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.64■■□□□ 1.05
GTF2A1LQ9UNN4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GTF2A1LQ9UNN4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GTF2A1LQ9UNN4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms