Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
DDX4Q9NQI0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
DDX4Q9NQI0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
DDX4Q9NQI0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.64■■■□□ 2.34
DDX4Q9NQI0 DUX4L18-201ENST00000553347 1267 ntBASIC29.64■■■□□ 2.34
DDX4Q9NQI0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
DDX4Q9NQI0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
DDX4Q9NQI0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX4Q9NQI0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX4Q9NQI0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
DDX4Q9NQI0 RP9P-202ENST00000450133 1212 ntBASIC29.63■■■□□ 2.33
DDX4Q9NQI0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX4Q9NQI0 AC093536.1-201ENST00000569153 554 ntBASIC29.62■■■□□ 2.33
DDX4Q9NQI0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
DDX4Q9NQI0 AC139426.1-201ENST00000568218 2529 ntBASIC29.62■■■□□ 2.33
DDX4Q9NQI0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.61■■■□□ 2.33
DDX4Q9NQI0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.61■■■□□ 2.33
DDX4Q9NQI0 RAP2CP1-202ENST00000605179 643 ntBASIC29.61■■■□□ 2.33
DDX4Q9NQI0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
DDX4Q9NQI0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
DDX4Q9NQI0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.6■■■□□ 2.33
DDX4Q9NQI0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.6■■■□□ 2.33
DDX4Q9NQI0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
DDX4Q9NQI0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.59■■■□□ 2.33
DDX4Q9NQI0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC29.59■■■□□ 2.33
DDX4Q9NQI0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
DDX4Q9NQI0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.59■■■□□ 2.33
DDX4Q9NQI0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
DDX4Q9NQI0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
DDX4Q9NQI0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
DDX4Q9NQI0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.57■■■□□ 2.32
DDX4Q9NQI0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.57■■■□□ 2.32
DDX4Q9NQI0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.57■■■□□ 2.32
DDX4Q9NQI0 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.57■■■□□ 2.32
DDX4Q9NQI0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
DDX4Q9NQI0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
DDX4Q9NQI0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
DDX4Q9NQI0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.56■■■□□ 2.32
DDX4Q9NQI0 SPCS2P3-201ENST00000500401 656 ntBASIC29.56■■■□□ 2.32
DDX4Q9NQI0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
DDX4Q9NQI0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
DDX4Q9NQI0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
DDX4Q9NQI0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
DDX4Q9NQI0 RARRES2P1-201ENST00000474487 481 ntBASIC29.55■■■□□ 2.32
DDX4Q9NQI0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.55■■■□□ 2.32
DDX4Q9NQI0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
DDX4Q9NQI0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.55■■■□□ 2.32
DDX4Q9NQI0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.54■■■□□ 2.32
DDX4Q9NQI0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
DDX4Q9NQI0 DUX4L9-201ENST00000449051 1259 ntBASIC29.54■■■□□ 2.32
DDX4Q9NQI0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.54■■■□□ 2.32
DDX4Q9NQI0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
DDX4Q9NQI0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.53■■■□□ 2.32
DDX4Q9NQI0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.53■■■□□ 2.32
DDX4Q9NQI0 AL359504.2-201ENST00000605506 1601 ntBASIC29.53■■■□□ 2.32
DDX4Q9NQI0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.52■■■□□ 2.32
DDX4Q9NQI0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
DDX4Q9NQI0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
DDX4Q9NQI0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
DDX4Q9NQI0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.32
DDX4Q9NQI0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.32
DDX4Q9NQI0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.51■■■□□ 2.31
DDX4Q9NQI0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
DDX4Q9NQI0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
DDX4Q9NQI0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
DDX4Q9NQI0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.5■■■□□ 2.31
DDX4Q9NQI0 MIR3960-201ENST00000583311 91 ntBASIC29.5■■■□□ 2.31
DDX4Q9NQI0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.5■■■□□ 2.31
DDX4Q9NQI0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.5■■■□□ 2.31
DDX4Q9NQI0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.5■■■□□ 2.31
DDX4Q9NQI0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
DDX4Q9NQI0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
DDX4Q9NQI0 WHAMMP3-201ENST00000611636 1609 ntBASIC29.49■■■□□ 2.31
DDX4Q9NQI0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.48■■■□□ 2.31
DDX4Q9NQI0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
DDX4Q9NQI0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.48■■■□□ 2.31
DDX4Q9NQI0 DRD5P2-201ENST00000421395 2012 ntBASIC29.48■■■□□ 2.31
DDX4Q9NQI0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
DDX4Q9NQI0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.47■■■□□ 2.31
DDX4Q9NQI0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
DDX4Q9NQI0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
DDX4Q9NQI0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
DDX4Q9NQI0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
DDX4Q9NQI0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
DDX4Q9NQI0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
DDX4Q9NQI0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
DDX4Q9NQI0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
DDX4Q9NQI0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
DDX4Q9NQI0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.44■■■□□ 2.3
DDX4Q9NQI0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.44■■■□□ 2.3
DDX4Q9NQI0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
DDX4Q9NQI0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.43■■■□□ 2.3
DDX4Q9NQI0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
DDX4Q9NQI0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
DDX4Q9NQI0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
DDX4Q9NQI0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
DDX4Q9NQI0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.42■■■□□ 2.3
DDX4Q9NQI0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.42■■■□□ 2.3
DDX4Q9NQI0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
DDX4Q9NQI0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms