Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MSL2Q9HCI7 AC126177.7-201ENST00000547904 679 ntBASIC21.22■□□□□ 0.99
MSL2Q9HCI7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
MSL2Q9HCI7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MSL2Q9HCI7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.22■□□□□ 0.99
MSL2Q9HCI7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.22■□□□□ 0.99
MSL2Q9HCI7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSL2Q9HCI7 WHAMMP3-201ENST00000611636 1609 ntBASIC21.21■□□□□ 0.99
MSL2Q9HCI7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
MSL2Q9HCI7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
MSL2Q9HCI7 GPX1-201ENST00000419349 1106 ntBASIC21.2■□□□□ 0.98
MSL2Q9HCI7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSL2Q9HCI7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSL2Q9HCI7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MSL2Q9HCI7 AC060814.1-201ENST00000554326 538 ntBASIC21.19■□□□□ 0.98
MSL2Q9HCI7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MSL2Q9HCI7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSL2Q9HCI7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSL2Q9HCI7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSL2Q9HCI7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MSL2Q9HCI7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MSL2Q9HCI7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.18■□□□□ 0.98
MSL2Q9HCI7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.18■□□□□ 0.98
MSL2Q9HCI7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
MSL2Q9HCI7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
MSL2Q9HCI7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSL2Q9HCI7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSL2Q9HCI7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.17■□□□□ 0.98
MSL2Q9HCI7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.17■□□□□ 0.98
MSL2Q9HCI7 AL449106.1-201ENST00000608517 1980 ntBASIC21.16■□□□□ 0.98
MSL2Q9HCI7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSL2Q9HCI7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.16■□□□□ 0.98
MSL2Q9HCI7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.16■□□□□ 0.98
MSL2Q9HCI7 HSD17B1P1-201ENST00000590052 955 ntBASIC21.16■□□□□ 0.98
MSL2Q9HCI7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSL2Q9HCI7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
MSL2Q9HCI7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MSL2Q9HCI7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MSL2Q9HCI7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSL2Q9HCI7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.14■□□□□ 0.97
MSL2Q9HCI7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSL2Q9HCI7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSL2Q9HCI7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MSL2Q9HCI7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MSL2Q9HCI7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.13■□□□□ 0.97
MSL2Q9HCI7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.13■□□□□ 0.97
MSL2Q9HCI7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MSL2Q9HCI7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
MSL2Q9HCI7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSL2Q9HCI7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSL2Q9HCI7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSL2Q9HCI7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSL2Q9HCI7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSL2Q9HCI7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSL2Q9HCI7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSL2Q9HCI7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MSL2Q9HCI7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.12■□□□□ 0.97
MSL2Q9HCI7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSL2Q9HCI7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSL2Q9HCI7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSL2Q9HCI7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSL2Q9HCI7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
MSL2Q9HCI7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSL2Q9HCI7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.1■□□□□ 0.97
MSL2Q9HCI7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSL2Q9HCI7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSL2Q9HCI7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSL2Q9HCI7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSL2Q9HCI7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSL2Q9HCI7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.08■□□□□ 0.97
MSL2Q9HCI7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MSL2Q9HCI7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
MSL2Q9HCI7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MSL2Q9HCI7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.08■□□□□ 0.97
MSL2Q9HCI7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.08■□□□□ 0.97
MSL2Q9HCI7 AL157400.5-201ENST00000507624 621 ntBASIC21.07■□□□□ 0.96
MSL2Q9HCI7 AC092296.2-201ENST00000589470 999 ntBASIC21.07■□□□□ 0.96
MSL2Q9HCI7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.07■□□□□ 0.96
MSL2Q9HCI7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSL2Q9HCI7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSL2Q9HCI7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MSL2Q9HCI7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.06■□□□□ 0.96
MSL2Q9HCI7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.06■□□□□ 0.96
MSL2Q9HCI7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSL2Q9HCI7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSL2Q9HCI7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
MSL2Q9HCI7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSL2Q9HCI7 RNF126P1-201ENST00000567452 1320 ntBASIC21.05■□□□□ 0.96
MSL2Q9HCI7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSL2Q9HCI7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.05■□□□□ 0.96
MSL2Q9HCI7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MSL2Q9HCI7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.05■□□□□ 0.96
MSL2Q9HCI7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSL2Q9HCI7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MSL2Q9HCI7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MSL2Q9HCI7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSL2Q9HCI7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MSL2Q9HCI7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MSL2Q9HCI7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
MSL2Q9HCI7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms