Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZNF556Q9HAH1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZNF556Q9HAH1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZNF556Q9HAH1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.73■■□□□ 1.23
ZNF556Q9HAH1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
ZNF556Q9HAH1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.73■■□□□ 1.23
ZNF556Q9HAH1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ZNF556Q9HAH1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.73■■□□□ 1.23
ZNF556Q9HAH1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ZNF556Q9HAH1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZNF556Q9HAH1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZNF556Q9HAH1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZNF556Q9HAH1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.71■■□□□ 1.23
ZNF556Q9HAH1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.7■■□□□ 1.22
ZNF556Q9HAH1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.7■■□□□ 1.22
ZNF556Q9HAH1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.7■■□□□ 1.22
ZNF556Q9HAH1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZNF556Q9HAH1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
ZNF556Q9HAH1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZNF556Q9HAH1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZNF556Q9HAH1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
ZNF556Q9HAH1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZNF556Q9HAH1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.68■■□□□ 1.22
ZNF556Q9HAH1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZNF556Q9HAH1 MIR6090-201ENST00000622481 60 ntBASIC22.67■■□□□ 1.22
ZNF556Q9HAH1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF556Q9HAH1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF556Q9HAH1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF556Q9HAH1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF556Q9HAH1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF556Q9HAH1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF556Q9HAH1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF556Q9HAH1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF556Q9HAH1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF556Q9HAH1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF556Q9HAH1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
ZNF556Q9HAH1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ZNF556Q9HAH1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ZNF556Q9HAH1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
ZNF556Q9HAH1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZNF556Q9HAH1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZNF556Q9HAH1 AC142472.1-201ENST00000612013 1741 ntBASIC22.64■■□□□ 1.21
ZNF556Q9HAH1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.64■■□□□ 1.21
ZNF556Q9HAH1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.64■■□□□ 1.21
ZNF556Q9HAH1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
ZNF556Q9HAH1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZNF556Q9HAH1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.64■■□□□ 1.21
ZNF556Q9HAH1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZNF556Q9HAH1 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.63■■□□□ 1.21
ZNF556Q9HAH1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZNF556Q9HAH1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
ZNF556Q9HAH1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
ZNF556Q9HAH1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ZNF556Q9HAH1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.62■■□□□ 1.21
ZNF556Q9HAH1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF556Q9HAH1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.61■■□□□ 1.21
ZNF556Q9HAH1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF556Q9HAH1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF556Q9HAH1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.61■■□□□ 1.21
ZNF556Q9HAH1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.6■■□□□ 1.21
ZNF556Q9HAH1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.6■■□□□ 1.21
ZNF556Q9HAH1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ZNF556Q9HAH1 SUZ12P1-203ENST00000578195 985 ntBASIC22.6■■□□□ 1.21
ZNF556Q9HAH1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZNF556Q9HAH1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.59■■□□□ 1.21
ZNF556Q9HAH1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.59■■□□□ 1.21
ZNF556Q9HAH1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.59■■□□□ 1.21
ZNF556Q9HAH1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ZNF556Q9HAH1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ZNF556Q9HAH1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ZNF556Q9HAH1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ZNF556Q9HAH1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.58■■□□□ 1.21
ZNF556Q9HAH1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.58■■□□□ 1.21
ZNF556Q9HAH1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ZNF556Q9HAH1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.57■■□□□ 1.2
ZNF556Q9HAH1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
ZNF556Q9HAH1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.57■■□□□ 1.2
ZNF556Q9HAH1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
ZNF556Q9HAH1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.57■■□□□ 1.2
ZNF556Q9HAH1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF556Q9HAH1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF556Q9HAH1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.56■■□□□ 1.2
ZNF556Q9HAH1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF556Q9HAH1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF556Q9HAH1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.56■■□□□ 1.2
ZNF556Q9HAH1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF556Q9HAH1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
ZNF556Q9HAH1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 AC093323.1-202ENST00000635031 2045 ntBASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 WHAMMP3-201ENST00000611636 1609 ntBASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF556Q9HAH1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms