Protein–RNA interactions for Protein: Q9GZV3

SLC5A7, High affinity choline transporter 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A7Q9GZV3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC5A7Q9GZV3 AC145676.1-201ENST00000514988 2004 ntBASIC20.68■□□□□ 0.9
SLC5A7Q9GZV3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC5A7Q9GZV3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC5A7Q9GZV3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC5A7Q9GZV3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC5A7Q9GZV3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC5A7Q9GZV3 SUZ12P1-203ENST00000578195 985 ntBASIC20.66■□□□□ 0.9
SLC5A7Q9GZV3 MIR6090-201ENST00000622481 60 ntBASIC20.66■□□□□ 0.9
SLC5A7Q9GZV3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC5A7Q9GZV3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC5A7Q9GZV3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC5A7Q9GZV3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC5A7Q9GZV3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC5A7Q9GZV3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC5A7Q9GZV3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC5A7Q9GZV3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC5A7Q9GZV3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC5A7Q9GZV3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLC5A7Q9GZV3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC5A7Q9GZV3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC5A7Q9GZV3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC5A7Q9GZV3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC5A7Q9GZV3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC5A7Q9GZV3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC5A7Q9GZV3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC5A7Q9GZV3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC5A7Q9GZV3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC5A7Q9GZV3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SLC5A7Q9GZV3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SLC5A7Q9GZV3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC5A7Q9GZV3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLC5A7Q9GZV3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC5A7Q9GZV3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC5A7Q9GZV3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
SLC5A7Q9GZV3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC5A7Q9GZV3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC5A7Q9GZV3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC5A7Q9GZV3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC5A7Q9GZV3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC5A7Q9GZV3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC5A7Q9GZV3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC5A7Q9GZV3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC5A7Q9GZV3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC5A7Q9GZV3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC5A7Q9GZV3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC5A7Q9GZV3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC5A7Q9GZV3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC5A7Q9GZV3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC5A7Q9GZV3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC5A7Q9GZV3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC5A7Q9GZV3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC5A7Q9GZV3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC5A7Q9GZV3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC5A7Q9GZV3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC5A7Q9GZV3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SLC5A7Q9GZV3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC5A7Q9GZV3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC5A7Q9GZV3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SLC5A7Q9GZV3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC5A7Q9GZV3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC5A7Q9GZV3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC5A7Q9GZV3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC5A7Q9GZV3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC5A7Q9GZV3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC5A7Q9GZV3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC5A7Q9GZV3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC5A7Q9GZV3 AP004609.3-201ENST00000610705 1884 ntBASIC20.56■□□□□ 0.88
SLC5A7Q9GZV3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC5A7Q9GZV3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC5A7Q9GZV3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC5A7Q9GZV3 DUX4L28-201ENST00000623687 678 ntBASIC20.55■□□□□ 0.88
SLC5A7Q9GZV3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC5A7Q9GZV3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC5A7Q9GZV3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC5A7Q9GZV3 AC092803.2-201ENST00000564287 1899 ntBASIC20.52■□□□□ 0.88
SLC5A7Q9GZV3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC5A7Q9GZV3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC5A7Q9GZV3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC5A7Q9GZV3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC5A7Q9GZV3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC5A7Q9GZV3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC5A7Q9GZV3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC5A7Q9GZV3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC5A7Q9GZV3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC5A7Q9GZV3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC5A7Q9GZV3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC5A7Q9GZV3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC5A7Q9GZV3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms