Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NICN1Q9BSH3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.08■□□□□ 0.96
NICN1Q9BSH3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NICN1Q9BSH3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NICN1Q9BSH3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NICN1Q9BSH3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NICN1Q9BSH3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NICN1Q9BSH3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.07■□□□□ 0.96
NICN1Q9BSH3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NICN1Q9BSH3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NICN1Q9BSH3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NICN1Q9BSH3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NICN1Q9BSH3 AC110285.7-201ENST00000624417 1536 ntBASIC21.06■□□□□ 0.96
NICN1Q9BSH3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NICN1Q9BSH3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NICN1Q9BSH3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NICN1Q9BSH3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NICN1Q9BSH3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NICN1Q9BSH3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NICN1Q9BSH3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NICN1Q9BSH3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NICN1Q9BSH3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NICN1Q9BSH3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NICN1Q9BSH3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NICN1Q9BSH3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.04■□□□□ 0.96
NICN1Q9BSH3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NICN1Q9BSH3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NICN1Q9BSH3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NICN1Q9BSH3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NICN1Q9BSH3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.03■□□□□ 0.96
NICN1Q9BSH3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.03■□□□□ 0.96
NICN1Q9BSH3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NICN1Q9BSH3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NICN1Q9BSH3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NICN1Q9BSH3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NICN1Q9BSH3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NICN1Q9BSH3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NICN1Q9BSH3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NICN1Q9BSH3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.02■□□□□ 0.96
NICN1Q9BSH3 AC142472.1-201ENST00000612013 1741 ntBASIC21.02■□□□□ 0.96
NICN1Q9BSH3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NICN1Q9BSH3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NICN1Q9BSH3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
NICN1Q9BSH3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NICN1Q9BSH3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NICN1Q9BSH3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NICN1Q9BSH3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NICN1Q9BSH3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.01■□□□□ 0.95
NICN1Q9BSH3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NICN1Q9BSH3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NICN1Q9BSH3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NICN1Q9BSH3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NICN1Q9BSH3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NICN1Q9BSH3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21■□□□□ 0.95
NICN1Q9BSH3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NICN1Q9BSH3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21■□□□□ 0.95
NICN1Q9BSH3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21■□□□□ 0.95
NICN1Q9BSH3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NICN1Q9BSH3 AC087741.3-201ENST00000624270 1347 ntBASIC21■□□□□ 0.95
NICN1Q9BSH3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NICN1Q9BSH3 AP006261.1-201ENST00000584783 668 ntBASIC20.99■□□□□ 0.95
NICN1Q9BSH3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NICN1Q9BSH3 WHAMMP3-201ENST00000611636 1609 ntBASIC20.98■□□□□ 0.95
NICN1Q9BSH3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NICN1Q9BSH3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.98■□□□□ 0.95
NICN1Q9BSH3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NICN1Q9BSH3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NICN1Q9BSH3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NICN1Q9BSH3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NICN1Q9BSH3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NICN1Q9BSH3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NICN1Q9BSH3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NICN1Q9BSH3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NICN1Q9BSH3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NICN1Q9BSH3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
NICN1Q9BSH3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NICN1Q9BSH3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NICN1Q9BSH3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NICN1Q9BSH3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NICN1Q9BSH3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NICN1Q9BSH3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NICN1Q9BSH3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NICN1Q9BSH3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NICN1Q9BSH3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.94■□□□□ 0.94
NICN1Q9BSH3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NICN1Q9BSH3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NICN1Q9BSH3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NICN1Q9BSH3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.93■□□□□ 0.94
NICN1Q9BSH3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
NICN1Q9BSH3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NICN1Q9BSH3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NICN1Q9BSH3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NICN1Q9BSH3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NICN1Q9BSH3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NICN1Q9BSH3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NICN1Q9BSH3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NICN1Q9BSH3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NICN1Q9BSH3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NICN1Q9BSH3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NICN1Q9BSH3 AL162393.1-201ENST00000437852 946 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms