Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PPP4R1Q8TF05 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PPP4R1Q8TF05 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PPP4R1Q8TF05 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PPP4R1Q8TF05 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PPP4R1Q8TF05 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PPP4R1Q8TF05 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PPP4R1Q8TF05 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.58■■□□□ 1.53
PPP4R1Q8TF05 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PPP4R1Q8TF05 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.57■■□□□ 1.52
PPP4R1Q8TF05 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PPP4R1Q8TF05 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
PPP4R1Q8TF05 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PPP4R1Q8TF05 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
PPP4R1Q8TF05 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.57■■□□□ 1.52
PPP4R1Q8TF05 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.57■■□□□ 1.52
PPP4R1Q8TF05 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.57■■□□□ 1.52
PPP4R1Q8TF05 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PPP4R1Q8TF05 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.56■■□□□ 1.52
PPP4R1Q8TF05 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PPP4R1Q8TF05 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.55■■□□□ 1.52
PPP4R1Q8TF05 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.55■■□□□ 1.52
PPP4R1Q8TF05 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PPP4R1Q8TF05 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.55■■□□□ 1.52
PPP4R1Q8TF05 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.55■■□□□ 1.52
PPP4R1Q8TF05 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PPP4R1Q8TF05 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PPP4R1Q8TF05 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PPP4R1Q8TF05 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.54■■□□□ 1.52
PPP4R1Q8TF05 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PPP4R1Q8TF05 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PPP4R1Q8TF05 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PPP4R1Q8TF05 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PPP4R1Q8TF05 AC020928.2-201ENST00000588717 2197 ntBASIC24.53■■□□□ 1.52
PPP4R1Q8TF05 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.53■■□□□ 1.52
PPP4R1Q8TF05 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PPP4R1Q8TF05 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PPP4R1Q8TF05 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PPP4R1Q8TF05 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.52■■□□□ 1.52
PPP4R1Q8TF05 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PPP4R1Q8TF05 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.51■■□□□ 1.51
PPP4R1Q8TF05 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PPP4R1Q8TF05 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PPP4R1Q8TF05 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PPP4R1Q8TF05 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
PPP4R1Q8TF05 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
PPP4R1Q8TF05 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.5■■□□□ 1.51
PPP4R1Q8TF05 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R1Q8TF05 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.48■■□□□ 1.51
PPP4R1Q8TF05 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PPP4R1Q8TF05 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.48■■□□□ 1.51
PPP4R1Q8TF05 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PPP4R1Q8TF05 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PPP4R1Q8TF05 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
PPP4R1Q8TF05 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R1Q8TF05 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R1Q8TF05 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PPP4R1Q8TF05 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R1Q8TF05 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
PPP4R1Q8TF05 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PPP4R1Q8TF05 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.46■■□□□ 1.51
PPP4R1Q8TF05 AC092803.2-201ENST00000564287 1899 ntBASIC24.46■■□□□ 1.51
PPP4R1Q8TF05 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
PPP4R1Q8TF05 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R1Q8TF05 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PPP4R1Q8TF05 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R1Q8TF05 DUSP8P4-201ENST00000399538 1761 ntBASIC24.45■■□□□ 1.5
PPP4R1Q8TF05 MIR639-201ENST00000384974 98 ntBASIC24.45■■□□□ 1.5
PPP4R1Q8TF05 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R1Q8TF05 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.44■■□□□ 1.5
PPP4R1Q8TF05 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R1Q8TF05 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.44■■□□□ 1.5
PPP4R1Q8TF05 MIR4449-201ENST00000578365 66 ntBASIC24.44■■□□□ 1.5
PPP4R1Q8TF05 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R1Q8TF05 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PPP4R1Q8TF05 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PPP4R1Q8TF05 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R1Q8TF05 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R1Q8TF05 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
PPP4R1Q8TF05 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.43■■□□□ 1.5
PPP4R1Q8TF05 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.43■■□□□ 1.5
PPP4R1Q8TF05 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
PPP4R1Q8TF05 LINC01971-201ENST00000617888 1048 ntBASIC24.42■■□□□ 1.5
PPP4R1Q8TF05 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R1Q8TF05 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R1Q8TF05 AP004609.3-201ENST00000610705 1884 ntBASIC24.42■■□□□ 1.5
PPP4R1Q8TF05 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R1Q8TF05 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.42■■□□□ 1.5
PPP4R1Q8TF05 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
PPP4R1Q8TF05 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.41■■□□□ 1.5
PPP4R1Q8TF05 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R1Q8TF05 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.41■■□□□ 1.5
PPP4R1Q8TF05 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R1Q8TF05 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R1Q8TF05 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R1Q8TF05 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.4■■□□□ 1.5
PPP4R1Q8TF05 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.4■■□□□ 1.5
PPP4R1Q8TF05 AC110285.7-201ENST00000624417 1536 ntBASIC24.4■■□□□ 1.5
PPP4R1Q8TF05 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R1Q8TF05 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms