Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RDH11Q8TC12 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RDH11Q8TC12 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.3■■□□□ 1.48
RDH11Q8TC12 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RDH11Q8TC12 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RDH11Q8TC12 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RDH11Q8TC12 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
RDH11Q8TC12 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.29■■□□□ 1.48
RDH11Q8TC12 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RDH11Q8TC12 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.28■■□□□ 1.48
RDH11Q8TC12 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.28■■□□□ 1.48
RDH11Q8TC12 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RDH11Q8TC12 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RDH11Q8TC12 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RDH11Q8TC12 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RDH11Q8TC12 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RDH11Q8TC12 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RDH11Q8TC12 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RDH11Q8TC12 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RDH11Q8TC12 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.27■■□□□ 1.48
RDH11Q8TC12 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.27■■□□□ 1.48
RDH11Q8TC12 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RDH11Q8TC12 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RDH11Q8TC12 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RDH11Q8TC12 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RDH11Q8TC12 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RDH11Q8TC12 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.26■■□□□ 1.47
RDH11Q8TC12 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RDH11Q8TC12 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RDH11Q8TC12 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.26■■□□□ 1.47
RDH11Q8TC12 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
RDH11Q8TC12 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.25■■□□□ 1.47
RDH11Q8TC12 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RDH11Q8TC12 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RDH11Q8TC12 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
RDH11Q8TC12 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RDH11Q8TC12 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.24■■□□□ 1.47
RDH11Q8TC12 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RDH11Q8TC12 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RDH11Q8TC12 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.23■■□□□ 1.47
RDH11Q8TC12 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.23■■□□□ 1.47
RDH11Q8TC12 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RDH11Q8TC12 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RDH11Q8TC12 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RDH11Q8TC12 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RDH11Q8TC12 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RDH11Q8TC12 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RDH11Q8TC12 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.22■■□□□ 1.47
RDH11Q8TC12 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.22■■□□□ 1.47
RDH11Q8TC12 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.21■■□□□ 1.47
RDH11Q8TC12 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RDH11Q8TC12 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RDH11Q8TC12 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RDH11Q8TC12 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.21■■□□□ 1.47
RDH11Q8TC12 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.21■■□□□ 1.47
RDH11Q8TC12 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RDH11Q8TC12 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.2■■□□□ 1.47
RDH11Q8TC12 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
RDH11Q8TC12 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.47
RDH11Q8TC12 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RDH11Q8TC12 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RDH11Q8TC12 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
RDH11Q8TC12 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RDH11Q8TC12 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RDH11Q8TC12 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
RDH11Q8TC12 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.18■■□□□ 1.46
RDH11Q8TC12 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
RDH11Q8TC12 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RDH11Q8TC12 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RDH11Q8TC12 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RDH11Q8TC12 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
RDH11Q8TC12 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.18■■□□□ 1.46
RDH11Q8TC12 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RDH11Q8TC12 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RDH11Q8TC12 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RDH11Q8TC12 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RDH11Q8TC12 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RDH11Q8TC12 AC021231.2-201ENST00000594613 730 ntBASIC24.17■■□□□ 1.46
RDH11Q8TC12 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
RDH11Q8TC12 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RDH11Q8TC12 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RDH11Q8TC12 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
RDH11Q8TC12 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
RDH11Q8TC12 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RDH11Q8TC12 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RDH11Q8TC12 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RDH11Q8TC12 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RDH11Q8TC12 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RDH11Q8TC12 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
RDH11Q8TC12 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
RDH11Q8TC12 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RDH11Q8TC12 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.14■■□□□ 1.45
RDH11Q8TC12 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RDH11Q8TC12 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RDH11Q8TC12 AC010501.1-201ENST00000606270 1962 ntBASIC24.14■■□□□ 1.45
RDH11Q8TC12 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RDH11Q8TC12 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
RDH11Q8TC12 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RDH11Q8TC12 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RDH11Q8TC12 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms