Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.95■□□□□ 0.94
CLDND2Q8NHS1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDND2Q8NHS1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDND2Q8NHS1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDND2Q8NHS1 ECEL1P2-201ENST00000461596 1295 ntBASIC20.94■□□□□ 0.94
CLDND2Q8NHS1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CLDND2Q8NHS1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDND2Q8NHS1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDND2Q8NHS1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLDND2Q8NHS1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDND2Q8NHS1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.93■□□□□ 0.94
CLDND2Q8NHS1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.93■□□□□ 0.94
CLDND2Q8NHS1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDND2Q8NHS1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLDND2Q8NHS1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDND2Q8NHS1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDND2Q8NHS1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDND2Q8NHS1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDND2Q8NHS1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDND2Q8NHS1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.91■□□□□ 0.94
CLDND2Q8NHS1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.91■□□□□ 0.94
CLDND2Q8NHS1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.91■□□□□ 0.94
CLDND2Q8NHS1 U85056.1-201ENST00000616429 682 ntBASIC20.91■□□□□ 0.94
CLDND2Q8NHS1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDND2Q8NHS1 AC012354.3-201ENST00000623734 483 ntBASIC20.9■□□□□ 0.94
CLDND2Q8NHS1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDND2Q8NHS1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDND2Q8NHS1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CLDND2Q8NHS1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDND2Q8NHS1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDND2Q8NHS1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CLDND2Q8NHS1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.89■□□□□ 0.94
CLDND2Q8NHS1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDND2Q8NHS1 AL157400.5-201ENST00000507624 621 ntBASIC20.89■□□□□ 0.93
CLDND2Q8NHS1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDND2Q8NHS1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CLDND2Q8NHS1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.88■□□□□ 0.93
CLDND2Q8NHS1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDND2Q8NHS1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.88■□□□□ 0.93
CLDND2Q8NHS1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDND2Q8NHS1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDND2Q8NHS1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDND2Q8NHS1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CLDND2Q8NHS1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDND2Q8NHS1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDND2Q8NHS1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.87■□□□□ 0.93
CLDND2Q8NHS1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDND2Q8NHS1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDND2Q8NHS1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDND2Q8NHS1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.86■□□□□ 0.93
CLDND2Q8NHS1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDND2Q8NHS1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDND2Q8NHS1 AL359258.2-201ENST00000564063 1566 ntBASIC20.85■□□□□ 0.93
CLDND2Q8NHS1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDND2Q8NHS1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDND2Q8NHS1 AP002414.2-202ENST00000590929 1450 ntBASIC20.85■□□□□ 0.93
CLDND2Q8NHS1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDND2Q8NHS1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDND2Q8NHS1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDND2Q8NHS1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDND2Q8NHS1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDND2Q8NHS1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDND2Q8NHS1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDND2Q8NHS1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDND2Q8NHS1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDND2Q8NHS1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDND2Q8NHS1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CLDND2Q8NHS1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.83■□□□□ 0.93
CLDND2Q8NHS1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
CLDND2Q8NHS1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CLDND2Q8NHS1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CLDND2Q8NHS1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CLDND2Q8NHS1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDND2Q8NHS1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDND2Q8NHS1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CLDND2Q8NHS1 AC018358.1-201ENST00000631079 1402 ntBASIC20.82■□□□□ 0.92
CLDND2Q8NHS1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDND2Q8NHS1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDND2Q8NHS1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDND2Q8NHS1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDND2Q8NHS1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDND2Q8NHS1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDND2Q8NHS1 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDND2Q8NHS1 DRD5P2-201ENST00000421395 2012 ntBASIC20.8■□□□□ 0.92
CLDND2Q8NHS1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDND2Q8NHS1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CLDND2Q8NHS1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 KRT18P60-201ENST00000312876 1297 ntBASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 AL033527.3-201ENST00000566366 1196 ntBASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 AC007029.1-201ENST00000604183 313 ntBASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDND2Q8NHS1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDND2Q8NHS1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms