Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.17■■□□□ 1.3
NUP43Q8NFH3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUP43Q8NFH3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.17■■□□□ 1.3
NUP43Q8NFH3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NUP43Q8NFH3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NUP43Q8NFH3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NUP43Q8NFH3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.14■■□□□ 1.3
NUP43Q8NFH3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
NUP43Q8NFH3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NUP43Q8NFH3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NUP43Q8NFH3 AC016575.1-201ENST00000607026 382 ntBASIC23.14■■□□□ 1.29
NUP43Q8NFH3 MIR7108-201ENST00000614319 87 ntBASIC23.14■■□□□ 1.29
NUP43Q8NFH3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NUP43Q8NFH3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NUP43Q8NFH3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NUP43Q8NFH3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NUP43Q8NFH3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NUP43Q8NFH3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.13■■□□□ 1.29
NUP43Q8NFH3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.13■■□□□ 1.29
NUP43Q8NFH3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NUP43Q8NFH3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.13■■□□□ 1.29
NUP43Q8NFH3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NUP43Q8NFH3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NUP43Q8NFH3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NUP43Q8NFH3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
NUP43Q8NFH3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NUP43Q8NFH3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
NUP43Q8NFH3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NUP43Q8NFH3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.11■■□□□ 1.29
NUP43Q8NFH3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NUP43Q8NFH3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
NUP43Q8NFH3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NUP43Q8NFH3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUP43Q8NFH3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NUP43Q8NFH3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.1■■□□□ 1.29
NUP43Q8NFH3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.1■■□□□ 1.29
NUP43Q8NFH3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NUP43Q8NFH3 AC142472.1-201ENST00000612013 1741 ntBASIC23.09■■□□□ 1.29
NUP43Q8NFH3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
NUP43Q8NFH3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NUP43Q8NFH3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.09■■□□□ 1.29
NUP43Q8NFH3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.09■■□□□ 1.29
NUP43Q8NFH3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.08■■□□□ 1.29
NUP43Q8NFH3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NUP43Q8NFH3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.08■■□□□ 1.29
NUP43Q8NFH3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.07■■□□□ 1.28
NUP43Q8NFH3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NUP43Q8NFH3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
NUP43Q8NFH3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.07■■□□□ 1.28
NUP43Q8NFH3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
NUP43Q8NFH3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.06■■□□□ 1.28
NUP43Q8NFH3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.06■■□□□ 1.28
NUP43Q8NFH3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NUP43Q8NFH3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.06■■□□□ 1.28
NUP43Q8NFH3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
NUP43Q8NFH3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NUP43Q8NFH3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.06■■□□□ 1.28
NUP43Q8NFH3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NUP43Q8NFH3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NUP43Q8NFH3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NUP43Q8NFH3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
NUP43Q8NFH3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.05■■□□□ 1.28
NUP43Q8NFH3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NUP43Q8NFH3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NUP43Q8NFH3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
NUP43Q8NFH3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.04■■□□□ 1.28
NUP43Q8NFH3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NUP43Q8NFH3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.04■■□□□ 1.28
NUP43Q8NFH3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
NUP43Q8NFH3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NUP43Q8NFH3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NUP43Q8NFH3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.03■■□□□ 1.28
NUP43Q8NFH3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
NUP43Q8NFH3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NUP43Q8NFH3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NUP43Q8NFH3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NUP43Q8NFH3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NUP43Q8NFH3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NUP43Q8NFH3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NUP43Q8NFH3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.02■■□□□ 1.28
NUP43Q8NFH3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NUP43Q8NFH3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NUP43Q8NFH3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NUP43Q8NFH3 AL359258.2-201ENST00000564063 1566 ntBASIC23.01■■□□□ 1.27
NUP43Q8NFH3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NUP43Q8NFH3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NUP43Q8NFH3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
NUP43Q8NFH3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.01■■□□□ 1.27
NUP43Q8NFH3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.01■■□□□ 1.27
NUP43Q8NFH3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NUP43Q8NFH3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23■■□□□ 1.27
NUP43Q8NFH3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23■■□□□ 1.27
NUP43Q8NFH3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23■■□□□ 1.27
NUP43Q8NFH3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NUP43Q8NFH3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
NUP43Q8NFH3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.98■■□□□ 1.27
NUP43Q8NFH3 AC091060.1-201ENST00000623524 1766 ntBASIC22.98■■□□□ 1.27
NUP43Q8NFH3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.98■■□□□ 1.27
NUP43Q8NFH3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NUP43Q8NFH3 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms