Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF1Q8ND25 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF1Q8ND25 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF1Q8ND25 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.7■□□□□ 0.9
ZNRF1Q8ND25 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF1Q8ND25 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ZNRF1Q8ND25 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNRF1Q8ND25 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNRF1Q8ND25 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNRF1Q8ND25 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNRF1Q8ND25 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNRF1Q8ND25 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNRF1Q8ND25 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
ZNRF1Q8ND25 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNRF1Q8ND25 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNRF1Q8ND25 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNRF1Q8ND25 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ZNRF1Q8ND25 AL359258.2-201ENST00000564063 1566 ntBASIC20.68■□□□□ 0.9
ZNRF1Q8ND25 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNRF1Q8ND25 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNRF1Q8ND25 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNRF1Q8ND25 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNRF1Q8ND25 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNRF1Q8ND25 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF1Q8ND25 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF1Q8ND25 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF1Q8ND25 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF1Q8ND25 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF1Q8ND25 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF1Q8ND25 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNRF1Q8ND25 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNRF1Q8ND25 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ZNRF1Q8ND25 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNRF1Q8ND25 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNRF1Q8ND25 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNRF1Q8ND25 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNRF1Q8ND25 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ZNRF1Q8ND25 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF1Q8ND25 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNRF1Q8ND25 AC126177.7-201ENST00000547904 679 ntBASIC20.63■□□□□ 0.89
ZNRF1Q8ND25 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNRF1Q8ND25 AP004609.3-201ENST00000610705 1884 ntBASIC20.62■□□□□ 0.89
ZNRF1Q8ND25 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNRF1Q8ND25 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNRF1Q8ND25 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNRF1Q8ND25 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNRF1Q8ND25 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNRF1Q8ND25 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNRF1Q8ND25 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNRF1Q8ND25 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNRF1Q8ND25 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNRF1Q8ND25 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNRF1Q8ND25 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ZNRF1Q8ND25 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNRF1Q8ND25 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNRF1Q8ND25 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNRF1Q8ND25 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNRF1Q8ND25 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNRF1Q8ND25 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNRF1Q8ND25 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNRF1Q8ND25 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ZNRF1Q8ND25 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNRF1Q8ND25 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNRF1Q8ND25 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNRF1Q8ND25 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
ZNRF1Q8ND25 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNRF1Q8ND25 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNRF1Q8ND25 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNRF1Q8ND25 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNRF1Q8ND25 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNRF1Q8ND25 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNRF1Q8ND25 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNRF1Q8ND25 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNRF1Q8ND25 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNRF1Q8ND25 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNRF1Q8ND25 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNRF1Q8ND25 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNRF1Q8ND25 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNRF1Q8ND25 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNRF1Q8ND25 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZNRF1Q8ND25 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.56■□□□□ 0.88
ZNRF1Q8ND25 AC060814.1-201ENST00000554326 538 ntBASIC20.56■□□□□ 0.88
ZNRF1Q8ND25 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms