Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.37■■■□□ 2.29
SLC44A5Q8NCS7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SLC44A5Q8NCS7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SLC44A5Q8NCS7 AC025884.2-201ENST00000553429 711 ntBASIC29.36■■■□□ 2.29
SLC44A5Q8NCS7 AC012354.3-201ENST00000623734 483 ntBASIC29.36■■■□□ 2.29
SLC44A5Q8NCS7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.36■■■□□ 2.29
SLC44A5Q8NCS7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.36■■■□□ 2.29
SLC44A5Q8NCS7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLC44A5Q8NCS7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLC44A5Q8NCS7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SLC44A5Q8NCS7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SLC44A5Q8NCS7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SLC44A5Q8NCS7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.35■■■□□ 2.29
SLC44A5Q8NCS7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
SLC44A5Q8NCS7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SLC44A5Q8NCS7 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.34■■■□□ 2.29
SLC44A5Q8NCS7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
SLC44A5Q8NCS7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SLC44A5Q8NCS7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
SLC44A5Q8NCS7 WHAMMP3-201ENST00000611636 1609 ntBASIC29.32■■■□□ 2.28
SLC44A5Q8NCS7 AC009831.1-201ENST00000580420 1582 ntBASIC29.32■■■□□ 2.28
SLC44A5Q8NCS7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
SLC44A5Q8NCS7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.32■■■□□ 2.28
SLC44A5Q8NCS7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SLC44A5Q8NCS7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.32■■■□□ 2.28
SLC44A5Q8NCS7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.32■■■□□ 2.28
SLC44A5Q8NCS7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
SLC44A5Q8NCS7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SLC44A5Q8NCS7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SLC44A5Q8NCS7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SLC44A5Q8NCS7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
SLC44A5Q8NCS7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SLC44A5Q8NCS7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.3■■■□□ 2.28
SLC44A5Q8NCS7 AL033527.3-201ENST00000566366 1196 ntBASIC29.29■■■□□ 2.28
SLC44A5Q8NCS7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
SLC44A5Q8NCS7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SLC44A5Q8NCS7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
SLC44A5Q8NCS7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
SLC44A5Q8NCS7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
SLC44A5Q8NCS7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SLC44A5Q8NCS7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SLC44A5Q8NCS7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.28■■■□□ 2.28
SLC44A5Q8NCS7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SLC44A5Q8NCS7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
SLC44A5Q8NCS7 LINC01003-201ENST00000564834 1764 ntBASIC29.28■■■□□ 2.28
SLC44A5Q8NCS7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
SLC44A5Q8NCS7 AL359504.2-201ENST00000605506 1601 ntBASIC29.27■■■□□ 2.28
SLC44A5Q8NCS7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
SLC44A5Q8NCS7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SLC44A5Q8NCS7 AC133552.2-201ENST00000619106 1032 ntBASIC29.26■■■□□ 2.27
SLC44A5Q8NCS7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
SLC44A5Q8NCS7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.25■■■□□ 2.27
SLC44A5Q8NCS7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SLC44A5Q8NCS7 AL592293.1-201ENST00000502889 1188 ntBASIC29.25■■■□□ 2.27
SLC44A5Q8NCS7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SLC44A5Q8NCS7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
SLC44A5Q8NCS7 AC026202.3-201ENST00000600805 1127 ntBASIC29.25■■■□□ 2.27
SLC44A5Q8NCS7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
SLC44A5Q8NCS7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SLC44A5Q8NCS7 AC004987.1-201ENST00000428627 508 ntBASIC29.24■■■□□ 2.27
SLC44A5Q8NCS7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SLC44A5Q8NCS7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.24■■■□□ 2.27
SLC44A5Q8NCS7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
SLC44A5Q8NCS7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
SLC44A5Q8NCS7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SLC44A5Q8NCS7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.23■■■□□ 2.27
SLC44A5Q8NCS7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
SLC44A5Q8NCS7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
SLC44A5Q8NCS7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.22■■■□□ 2.27
SLC44A5Q8NCS7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.22■■■□□ 2.27
SLC44A5Q8NCS7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
SLC44A5Q8NCS7 AC093536.1-201ENST00000569153 554 ntBASIC29.22■■■□□ 2.27
SLC44A5Q8NCS7 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.22■■■□□ 2.27
SLC44A5Q8NCS7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.22■■■□□ 2.27
SLC44A5Q8NCS7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SLC44A5Q8NCS7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.22■■■□□ 2.27
SLC44A5Q8NCS7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SLC44A5Q8NCS7 RP9P-202ENST00000450133 1212 ntBASIC29.21■■■□□ 2.27
SLC44A5Q8NCS7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SLC44A5Q8NCS7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
SLC44A5Q8NCS7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.2■■■□□ 2.27
SLC44A5Q8NCS7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
SLC44A5Q8NCS7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SLC44A5Q8NCS7 ATP5G2P3-201ENST00000429083 425 ntBASIC29.2■■■□□ 2.26
SLC44A5Q8NCS7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
SLC44A5Q8NCS7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
SLC44A5Q8NCS7 AC129492.7-201ENST00000622992 756 ntBASIC29.19■■■□□ 2.26
SLC44A5Q8NCS7 AL449106.1-201ENST00000608517 1980 ntBASIC29.19■■■□□ 2.26
SLC44A5Q8NCS7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
SLC44A5Q8NCS7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
SLC44A5Q8NCS7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.18■■■□□ 2.26
SLC44A5Q8NCS7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.18■■■□□ 2.26
SLC44A5Q8NCS7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.18■■■□□ 2.26
SLC44A5Q8NCS7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.18■■■□□ 2.26
SLC44A5Q8NCS7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.18■■■□□ 2.26
SLC44A5Q8NCS7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.18■■■□□ 2.26
SLC44A5Q8NCS7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SLC44A5Q8NCS7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SLC44A5Q8NCS7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SLC44A5Q8NCS7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.17■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms