Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
PCDH20Q8N6Y1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.25■■□□□ 1.63
PCDH20Q8N6Y1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
PCDH20Q8N6Y1 ECEL1P2-201ENST00000461596 1295 ntBASIC25.23■■□□□ 1.63
PCDH20Q8N6Y1 AL157400.5-201ENST00000507624 621 ntBASIC25.23■■□□□ 1.63
PCDH20Q8N6Y1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH20Q8N6Y1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH20Q8N6Y1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 LINC01003-201ENST00000564834 1764 ntBASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
PCDH20Q8N6Y1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH20Q8N6Y1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH20Q8N6Y1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
PCDH20Q8N6Y1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH20Q8N6Y1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH20Q8N6Y1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH20Q8N6Y1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH20Q8N6Y1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH20Q8N6Y1 WHAMMP3-201ENST00000611636 1609 ntBASIC25.18■■□□□ 1.62
PCDH20Q8N6Y1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH20Q8N6Y1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDH20Q8N6Y1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH20Q8N6Y1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.17■■□□□ 1.62
PCDH20Q8N6Y1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.17■■□□□ 1.62
PCDH20Q8N6Y1 ABHD17AP5-201ENST00000580133 923 ntBASIC25.17■■□□□ 1.62
PCDH20Q8N6Y1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
PCDH20Q8N6Y1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH20Q8N6Y1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH20Q8N6Y1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH20Q8N6Y1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH20Q8N6Y1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDH20Q8N6Y1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDH20Q8N6Y1 BX255925.1-201ENST00000566954 1854 ntBASIC25.13■■□□□ 1.61
PCDH20Q8N6Y1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH20Q8N6Y1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDH20Q8N6Y1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDH20Q8N6Y1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH20Q8N6Y1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH20Q8N6Y1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDH20Q8N6Y1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH20Q8N6Y1 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH20Q8N6Y1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH20Q8N6Y1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDH20Q8N6Y1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH20Q8N6Y1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDH20Q8N6Y1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH20Q8N6Y1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH20Q8N6Y1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PCDH20Q8N6Y1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 SMPD5-203ENST00000639008 1464 ntBASIC25.08■■□□□ 1.6
PCDH20Q8N6Y1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
PCDH20Q8N6Y1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 AC025884.2-201ENST00000553429 711 ntBASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH20Q8N6Y1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.06■■□□□ 1.6
PCDH20Q8N6Y1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH20Q8N6Y1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH20Q8N6Y1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 AC007029.1-201ENST00000604183 313 ntBASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 AL121749.1-202ENST00000609313 2153 ntBASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms