Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
PCDH20Q8N6Y1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.25■■□□□ 1.63
PCDH20Q8N6Y1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
PCDH20Q8N6Y1 ECEL1P2-201ENST00000461596 1295 ntBASIC25.23■■□□□ 1.63
PCDH20Q8N6Y1 AL157400.5-201ENST00000507624 621 ntBASIC25.23■■□□□ 1.63
PCDH20Q8N6Y1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH20Q8N6Y1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH20Q8N6Y1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 LINC01003-201ENST00000564834 1764 ntBASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH20Q8N6Y1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
PCDH20Q8N6Y1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH20Q8N6Y1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH20Q8N6Y1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
PCDH20Q8N6Y1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH20Q8N6Y1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH20Q8N6Y1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH20Q8N6Y1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH20Q8N6Y1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH20Q8N6Y1 WHAMMP3-201ENST00000611636 1609 ntBASIC25.18■■□□□ 1.62
PCDH20Q8N6Y1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH20Q8N6Y1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDH20Q8N6Y1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH20Q8N6Y1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.17■■□□□ 1.62
PCDH20Q8N6Y1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.17■■□□□ 1.62
PCDH20Q8N6Y1 ABHD17AP5-201ENST00000580133 923 ntBASIC25.17■■□□□ 1.62
PCDH20Q8N6Y1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDH20Q8N6Y1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
PCDH20Q8N6Y1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH20Q8N6Y1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH20Q8N6Y1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH20Q8N6Y1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH20Q8N6Y1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDH20Q8N6Y1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDH20Q8N6Y1 BX255925.1-201ENST00000566954 1854 ntBASIC25.13■■□□□ 1.61
PCDH20Q8N6Y1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH20Q8N6Y1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDH20Q8N6Y1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDH20Q8N6Y1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH20Q8N6Y1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH20Q8N6Y1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDH20Q8N6Y1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH20Q8N6Y1 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH20Q8N6Y1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH20Q8N6Y1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH20Q8N6Y1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDH20Q8N6Y1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH20Q8N6Y1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDH20Q8N6Y1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH20Q8N6Y1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH20Q8N6Y1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PCDH20Q8N6Y1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH20Q8N6Y1 SMPD5-203ENST00000639008 1464 ntBASIC25.08■■□□□ 1.6
PCDH20Q8N6Y1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
PCDH20Q8N6Y1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 AC025884.2-201ENST00000553429 711 ntBASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDH20Q8N6Y1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH20Q8N6Y1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.06■■□□□ 1.6
PCDH20Q8N6Y1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH20Q8N6Y1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH20Q8N6Y1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 AC007029.1-201ENST00000604183 313 ntBASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH20Q8N6Y1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH20Q8N6Y1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 AL121749.1-202ENST00000609313 2153 ntBASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms