Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TTC39CQ8N584 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TTC39CQ8N584 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
TTC39CQ8N584 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TTC39CQ8N584 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.42■■□□□ 1.82
TTC39CQ8N584 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
TTC39CQ8N584 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.42■■□□□ 1.82
TTC39CQ8N584 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.42■■□□□ 1.82
TTC39CQ8N584 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
TTC39CQ8N584 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TTC39CQ8N584 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
TTC39CQ8N584 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.41■■□□□ 1.82
TTC39CQ8N584 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TTC39CQ8N584 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
TTC39CQ8N584 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TTC39CQ8N584 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TTC39CQ8N584 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TTC39CQ8N584 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TTC39CQ8N584 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TTC39CQ8N584 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
TTC39CQ8N584 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.4■■□□□ 1.82
TTC39CQ8N584 AC022413.1-201ENST00000624602 984 ntBASIC26.4■■□□□ 1.82
TTC39CQ8N584 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
TTC39CQ8N584 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
TTC39CQ8N584 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
TTC39CQ8N584 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
TTC39CQ8N584 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TTC39CQ8N584 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TTC39CQ8N584 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TTC39CQ8N584 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.37■■□□□ 1.81
TTC39CQ8N584 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.37■■□□□ 1.81
TTC39CQ8N584 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TTC39CQ8N584 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TTC39CQ8N584 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
TTC39CQ8N584 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TTC39CQ8N584 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC39CQ8N584 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.34■■□□□ 1.81
TTC39CQ8N584 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.34■■□□□ 1.81
TTC39CQ8N584 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC39CQ8N584 GPX1-201ENST00000419349 1106 ntBASIC26.34■■□□□ 1.81
TTC39CQ8N584 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.34■■□□□ 1.81
TTC39CQ8N584 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.34■■□□□ 1.81
TTC39CQ8N584 AC092296.2-201ENST00000589470 999 ntBASIC26.34■■□□□ 1.81
TTC39CQ8N584 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC39CQ8N584 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39CQ8N584 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.33■■□□□ 1.81
TTC39CQ8N584 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39CQ8N584 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39CQ8N584 AC142472.1-201ENST00000612013 1741 ntBASIC26.32■■□□□ 1.8
TTC39CQ8N584 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39CQ8N584 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39CQ8N584 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39CQ8N584 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.31■■□□□ 1.8
TTC39CQ8N584 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39CQ8N584 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39CQ8N584 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39CQ8N584 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39CQ8N584 ECEL1P2-201ENST00000461596 1295 ntBASIC26.3■■□□□ 1.8
TTC39CQ8N584 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39CQ8N584 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39CQ8N584 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39CQ8N584 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.29■■□□□ 1.8
TTC39CQ8N584 AL157400.5-201ENST00000507624 621 ntBASIC26.29■■□□□ 1.8
TTC39CQ8N584 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39CQ8N584 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39CQ8N584 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TTC39CQ8N584 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.28■■□□□ 1.8
TTC39CQ8N584 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TTC39CQ8N584 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TTC39CQ8N584 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.27■■□□□ 1.8
TTC39CQ8N584 AP004609.3-201ENST00000610705 1884 ntBASIC26.27■■□□□ 1.8
TTC39CQ8N584 AL121749.1-202ENST00000609313 2153 ntBASIC26.26■■□□□ 1.79
TTC39CQ8N584 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.26■■□□□ 1.79
TTC39CQ8N584 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39CQ8N584 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
TTC39CQ8N584 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39CQ8N584 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39CQ8N584 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39CQ8N584 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC39CQ8N584 AL359504.2-201ENST00000605506 1601 ntBASIC26.25■■□□□ 1.79
TTC39CQ8N584 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.25■■□□□ 1.79
TTC39CQ8N584 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.25■■□□□ 1.79
TTC39CQ8N584 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC39CQ8N584 RNF126P1-201ENST00000567452 1320 ntBASIC26.24■■□□□ 1.79
TTC39CQ8N584 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC39CQ8N584 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC39CQ8N584 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TTC39CQ8N584 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC39CQ8N584 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.23■■□□□ 1.79
TTC39CQ8N584 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
TTC39CQ8N584 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
TTC39CQ8N584 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.22■■□□□ 1.79
TTC39CQ8N584 HSD17B1P1-201ENST00000590052 955 ntBASIC26.22■■□□□ 1.79
TTC39CQ8N584 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TTC39CQ8N584 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC39CQ8N584 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39CQ8N584 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.21■■□□□ 1.79
TTC39CQ8N584 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.21■■□□□ 1.79
TTC39CQ8N584 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39CQ8N584 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms