Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CARFQ8N187 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.39
CARFQ8N187 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CARFQ8N187 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CARFQ8N187 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.69■■□□□ 1.38
CARFQ8N187 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CARFQ8N187 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.69■■□□□ 1.38
CARFQ8N187 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.69■■□□□ 1.38
CARFQ8N187 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.69■■□□□ 1.38
CARFQ8N187 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CARFQ8N187 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CARFQ8N187 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CARFQ8N187 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CARFQ8N187 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CARFQ8N187 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CARFQ8N187 LINC01003-201ENST00000564834 1764 ntBASIC23.68■■□□□ 1.38
CARFQ8N187 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CARFQ8N187 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CARFQ8N187 KRT18P60-201ENST00000312876 1297 ntBASIC23.67■■□□□ 1.38
CARFQ8N187 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CARFQ8N187 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CARFQ8N187 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
CARFQ8N187 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CARFQ8N187 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CARFQ8N187 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CARFQ8N187 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.66■■□□□ 1.38
CARFQ8N187 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.66■■□□□ 1.38
CARFQ8N187 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CARFQ8N187 AC026202.3-201ENST00000600805 1127 ntBASIC23.66■■□□□ 1.38
CARFQ8N187 AC133552.2-201ENST00000619106 1032 ntBASIC23.66■■□□□ 1.38
CARFQ8N187 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CARFQ8N187 AC009831.1-201ENST00000580420 1582 ntBASIC23.65■■□□□ 1.38
CARFQ8N187 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CARFQ8N187 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CARFQ8N187 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CARFQ8N187 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CARFQ8N187 AC139426.1-201ENST00000568218 2529 ntBASIC23.64■■□□□ 1.38
CARFQ8N187 AL359504.2-201ENST00000605506 1601 ntBASIC23.64■■□□□ 1.38
CARFQ8N187 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CARFQ8N187 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CARFQ8N187 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.63■■□□□ 1.37
CARFQ8N187 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CARFQ8N187 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CARFQ8N187 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.63■■□□□ 1.37
CARFQ8N187 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CARFQ8N187 AC093536.1-201ENST00000569153 554 ntBASIC23.63■■□□□ 1.37
CARFQ8N187 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.63■■□□□ 1.37
CARFQ8N187 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
CARFQ8N187 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.63■■□□□ 1.37
CARFQ8N187 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CARFQ8N187 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.63■■□□□ 1.37
CARFQ8N187 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CARFQ8N187 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CARFQ8N187 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.62■■□□□ 1.37
CARFQ8N187 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CARFQ8N187 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CARFQ8N187 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CARFQ8N187 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CARFQ8N187 RAP2CP1-202ENST00000605179 643 ntBASIC23.62■■□□□ 1.37
CARFQ8N187 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CARFQ8N187 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CARFQ8N187 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.61■■□□□ 1.37
CARFQ8N187 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CARFQ8N187 TSPY13P-201ENST00000338964 914 ntBASIC23.6■■□□□ 1.37
CARFQ8N187 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CARFQ8N187 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.59■■□□□ 1.37
CARFQ8N187 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CARFQ8N187 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CARFQ8N187 BX255925.1-201ENST00000566954 1854 ntBASIC23.58■■□□□ 1.37
CARFQ8N187 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CARFQ8N187 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CARFQ8N187 AL592293.1-201ENST00000502889 1188 ntBASIC23.58■■□□□ 1.37
CARFQ8N187 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CARFQ8N187 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CARFQ8N187 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CARFQ8N187 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CARFQ8N187 ATP5G2P3-201ENST00000429083 425 ntBASIC23.57■■□□□ 1.36
CARFQ8N187 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.57■■□□□ 1.36
CARFQ8N187 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CARFQ8N187 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CARFQ8N187 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CARFQ8N187 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CARFQ8N187 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CARFQ8N187 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CARFQ8N187 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
CARFQ8N187 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CARFQ8N187 AC004987.1-201ENST00000428627 508 ntBASIC23.55■■□□□ 1.36
CARFQ8N187 AC129492.7-201ENST00000622992 756 ntBASIC23.55■■□□□ 1.36
CARFQ8N187 AC142086.6-201ENST00000621154 1765 ntBASIC23.55■■□□□ 1.36
CARFQ8N187 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CARFQ8N187 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CARFQ8N187 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CARFQ8N187 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
CARFQ8N187 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
CARFQ8N187 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.54■■□□□ 1.36
CARFQ8N187 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CARFQ8N187 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CARFQ8N187 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CARFQ8N187 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.53■■□□□ 1.36
CARFQ8N187 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms